SWI5/YDR146C Literature Guide Help

Other names published for SWI5: YDR146C

SWI5 - Protein-Nucleic Acid Interactions (29)

ReferenceOther Genes Addressed
Darieva Z, et al.  (2012) Protein kinase C regulates late cell cycle-dependent gene expression. Mol Cell Biol 32(22):4651-61
Geertz M, et al.  (2012) Massively parallel measurements of molecular interaction kinetics on a microfluidic platform. Proc Natl Acad Sci U S A 109(41):16540-5
Takahata S, et al.  (2011) Repressive chromatin affects factor binding at yeast HO (homothallic switching) promoter. J Biol Chem 286(40):34809-19
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
Di Talia S, et al.  (2009) Daughter-specific transcription factors regulate cell size control in budding yeast. PLoS Biol 7(10):e1000221
Gkikopoulos T, et al.  (2009) SWI/SNF and Asf1p cooperate to displace histones during induction of the saccharomyces cerevisiae HO promoter. Mol Cell Biol 29(15):4057-66
Takahata S, et al.  (2009) FACT and Asf1 regulate nucleosome dynamics and coactivator binding at the HO promoter. Mol Cell 34(4):405-15
Ye C, et al.  (2009) Using network component analysis to dissect regulatory networks mediated by transcription factors in yeast. PLoS Comput Biol 5(3):e1000311
Voth WP, et al.  (2007) Forkhead proteins control the outcome of transcription factor binding by antiactivation. EMBO J 26(20):4324-34
Workman CT, et al.  (2006) A systems approach to mapping DNA damage response pathways. Science 312(5776):1054-9
Yu X, et al.  (2006) Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae. Nucleic Acids Res 34(3):917-27
Hvidsten TR, et al.  (2005) Discovering regulatory binding-site modules using rule-based learning. Genome Res 15(6):856-66
Mathias JR, et al.  (2004) Repression of the yeast HO gene by the MATalpha2 and MATa1 homeodomain proteins. Nucleic Acids Res 32(22):6469-78
Reynolds D, et al.  (2003) Recruitment of Thr 319-phosphorylated Ndd1p to the FHA domain of Fkh2p requires Clb kinase activity: a mechanism for CLB cluster gene activation. Genes Dev 17(14):1789-802
Liu XS, et al.  (2002) An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments. Nat Biotechnol 20(8):835-9
Simon I, et al.  (2001) Serial regulation of transcriptional regulators in the yeast cell cycle. Cell 106(6):697-708
Measday V, et al.  (2000) Interactions between Pho85 cyclin-dependent kinase complexes and the Swi5 transcription factor in budding yeast. Mol Microbiol 35(4):825-34
Cosma MP, et al.  (1999) Ordered recruitment of transcription and chromatin remodeling factors to a cell cycle- and developmentally regulated promoter. Cell 97(3):299-311
McBride HJ, et al.  (1999) Distinct regions of the Swi5 and Ace2 transcription factors are required for specific gene activation. J Biol Chem 274(30):21029-36
Bhoite LT and Stillman DJ  (1998) Residues in the Swi5 zinc finger protein that mediate cooperative DNA binding with the Pho2 homeodomain protein. Mol Cell Biol 18(11):6436-46
McBride HJ, et al.  (1997) Long-range interactions at the HO promoter. Mol Cell Biol 17(5):2669-78
Dohrmann PR, et al.  (1996) Role of negative regulation in promoter specificity of the homologous transcriptional activators Ace2p and Swi5p. Mol Cell Biol 16(4):1746-58
Brazas RM, et al.  (1995) Determining the requirements for cooperative DNA binding by Swi5p and Pho2p (Grf10p/Bas2p) at the HO promoter. J Biol Chem 270(49):29151-61
Brazas RM and Stillman DJ  (1993) Identification and purification of a protein that binds DNA cooperatively with the yeast SWI5 protein. Mol Cell Biol 13(9):5524-37
Brazas RM and Stillman DJ  (1993) The Swi5 zinc-finger and Grf10 homeodomain proteins bind DNA cooperatively at the yeast HO promoter. Proc Natl Acad Sci U S A 90(23):11237-41
Nakaseko Y, et al.  (1992) Adjacent zinc-finger motifs in multiple zinc-finger peptides from SWI5 form structurally independent, flexibly linked domains. J Mol Biol 228(2):619-36
Corton JC and Johnston SA  (1989) Altering DNA-binding specificity of GAL4 requires sequences adjacent to the zinc finger. Nature 340(6236):724-7
Stillman DJ, et al.  (1988) Characterization of a transcription factor involved in mother cell specific transcription of the yeast HO gene. EMBO J 7(2):485-94