MSN4/YKL062W Literature Guide Help

Other names published for MSN4: YKL062W

MSN4 - Protein-Nucleic Acid Interactions (15)

ReferenceOther Genes Addressed
Huebert DJ, et al.  (2012) Dynamic changes in nucleosome occupancy are not predictive of gene expression dynamics but are linked to transcription and chromatin regulators. Mol Cell Biol 32(9):1645-53
Ames RM and Lovell SC  (2011) Diversification at transcription factor binding sites within a species and the implications for environmental adaptation. Mol Biol Evol 28(12):3331-44
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
Kahana S, et al.  (2010) Functional Dissection of IME1 Transcription Using Quantitative Promoter-Reporter Screening. Genetics 186(3):829-41
Morris RT, et al.  (2010) Ceres: software for the integrated analysis of transcription factor binding sites and nucleosome positions in Saccharomyces cerevisiae. Bioinformatics 26(2):168-74
Ni L, et al.  (2009) Dynamic and complex transcription factor binding during an inducible response in yeast. Genes Dev 23(11):1351-63
Erkina TY, et al.  (2008) Different requirements of the SWI/SNF complex for robust nucleosome displacement at promoters of heat shock factor and Msn2- and Msn4-regulated heat shock genes. Mol Cell Biol 28(4):1207-17
Mitchell L, et al.  (2008) Functional dissection of the NuA4 histone acetyltransferase reveals its role as a genetic hub and that Eaf1 is essential for complex integrity. Mol Cell Biol 28(7):2244-56
Gat-Viks I and Shamir R  (2007) Refinement and expansion of signaling pathways: The osmotic response network in yeast. Genome Res 17(3):358-67
Workman CT, et al.  (2006) A systems approach to mapping DNA damage response pathways. Science 312(5776):1054-9
Yu X, et al.  (2006) Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae. Nucleic Acids Res 34(3):917-27
Lagorce A, et al.  (2003) Genome-wide analysis of the response to cell wall mutations in the yeast Saccharomyces cerevisiae. J Biol Chem 278(22):20345-57
Herrero P, et al.  (1999) Functional characterization of transcriptional regulatory elements in the upstream region of the yeast GLK1 gene. Biochem J 343 Pt 2():319-25
Martinez-Pastor MT, et al.  (1996) The Saccharomyces cerevisiae zinc finger proteins Msn2p and Msn4p are required for transcriptional induction through the stress response element (STRE). EMBO J 15(9):2227-35