LEU3/YLR451W Literature Guide Help

Other names published for LEU3: YLR451W

LEU3 - Protein-Nucleic Acid Interactions (19)

ReferenceOther Genes Addressed
Sharon E, et al.  (2012) Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.LID - 10.1038/nbt.2205 [doi] Nat Biotechnol ()
Bedekovics T, et al.  (2011) Leucine biosynthesis regulates cytoplasmic iron-sulfur enzyme biogenesis in an Atm1p-independent manner. J Biol Chem 286(47):40878-88
Pan J, et al.  (2011) A Hierarchical Combination of Factors Shapes the Genome-wide Topography of Yeast Meiotic Recombination Initiation. Cell 144(5):719-31
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Ihrig J, et al.  (2010) Iron Regulation through the Back Door: Iron-Dependent Metabolite Levels Contribute to Transcriptional Adaptation to Iron Deprivation in Saccharomyces cerevisiae. Eukaryot Cell 9(3):460-71
Ye C, et al.  (2009) Using network component analysis to dissect regulatory networks mediated by transcription factors in yeast. PLoS Comput Biol 5(3):e1000311
Lu CC, et al.  (2008) Extracting transcription factor binding sites from unaligned gene sequences with statistical models. BMC Bioinformatics 9 Suppl 12:S7
Fitzgerald MX, et al.  (2006) Structure of a Leu3-DNA complex: recognition of everted CGG half-sites by a Zn2Cys6 binuclear cluster protein. Structure 14(4):725-35
Liu X, et al.  (2006) Whole-genome comparison of Leu3 binding in vitro and in vivo reveals the importance of nucleosome occupancy in target site selection. Genome Res 16(12):1517-28
Tang L, et al.  (2006) Inferring direct regulatory targets from expression and genome location analyses: a comparison of transcription factor deletion and overexpression. BMC Genomics 7():215
Liu X, et al.  (2005) DIP-chip: rapid and accurate determination of DNA-binding specificity. Genome Res 15(3):421-7
Harbison CT, et al.  (2004) Transcriptional regulatory code of a eukaryotic genome. Nature 431(7004):99-104
Liu X and Clarke ND  (2002) Rationalization of gene regulation by a eukaryotic transcription factor: calculation of regulatory region occupancy from predicted binding affinities. J Mol Biol 323(1):1-8
Nielsen PS, et al.  (2001) Transcriptional regulation of the Saccharomyces cerevisiae amino acid permease gene BAP2. Mol Gen Genet 264(5):613-22
De Boer M, et al.  (1998) Regulation of expression of the amino acid transporter gene BAP3 in Saccharomyces cerevisiae. Mol Microbiol 30(3):603-13
Mamane Y, et al.  (1998) A linker region of the yeast zinc cluster protein leu3p specifies binding to everted repeat DNA. J Biol Chem 273(29):18556-61
Noel J and Turcotte B  (1998) Zinc cluster proteins Leu3p and Uga3p recognize highly related but distinct DNA targets. J Biol Chem 273(28):17463-8
Didion T, et al.  (1996) Amino acids induce expression of BAP2, a branched-chain amino acid permease gene in Saccharomyces cerevisiae. J Bacteriol 178(7):2025-9
Hellauer K, et al.  (1996) A novel DNA binding motif for yeast zinc cluster proteins: the Leu3p and Pdr3p transcriptional activators recognize everted repeats. Mol Cell Biol 16(11):6096-102