HTA2/YBL003C Literature Guide Help

Other names published for HTA2: H2A2, YBL003C

HTA2 - Protein-Nucleic Acid Interactions (37)

ReferenceOther Genes Addressed
Chavez MS, et al.  (2012) The conformational flexibility of the C-terminus of histone H4 promotes histone octamer and nucleosome stability and yeast viability. Epigenetics Chromatin 5(1):5
Krassovsky K, et al.  (2012) Tripartite organization of centromeric chromatin in budding yeast. Proc Natl Acad Sci U S A 109(1):243-8
Zunder RM and Rine J  (2012) Direct interplay among histones, histone chaperones, and a chromatin boundary protein in the control of histone gene expression. Mol Cell Biol 32(21):4337-49
Andress EJ, et al.  (2011) Dia2 Controls Transcription by Mediating Assembly of the RSC Complex. PLoS One 6(6):e21172
Bintu L, et al.  (2011) The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.LID - 10.1038/nsmb.2164 [doi] Nat Struct Mol Biol ()
Cole HA, et al.  (2011) Activation-induced disruption of nucleosome position clusters on the coding regions of Gcn4-dependent genes extends into neighbouring genes. Nucleic Acids Res 39(22):9521-35
Ivanovska I, et al.  (2011) Control of chromatin structure by spt6: different consequences in coding and regulatory regions. Mol Cell Biol 31(3):531-41
Wittner M, et al.  (2011) Establishment and maintenance of alternative chromatin States at a multicopy gene locus. Cell 145(4):543-54
Altaf M, et al.  (2010) NuA4-dependent acetylation of nucleosomal histones H4 and H2A directly stimulates incorporation of H2A.Z by the SWR1 complex. J Biol Chem 285(21):15966-77
Andrews AJ, et al.  (2010) The histone chaperone Nap1 promotes nucleosome assembly by eliminating nonnucleosomal histone DNA interactions. Mol Cell 37(6):834-42
Cesarini E, et al.  (2010) RNA Polymerase I Transcription Silences Noncoding RNAs at the Ribosomal DNA Locus in Saccharomyces cerevisiae. Eukaryot Cell 9(2):325-35
Luk E, et al.  (2010) Stepwise Histone Replacement by SWR1 Requires Dual Activation with Histone H2A.Z and Canonical Nucleosome. Cell 143(5):725-36
Ogawa R, et al.  (2010) Computational prediction of nucleosome positioning by calculating the relative fragment frequency index of nucleosomal sequences. FEBS Lett 584(8):1498-502
Rowe CE and Narlikar GJ  (2010) The ATP-Dependent Remodeler RSC Transfers Histone Dimers and Octamers through the Rapid Formation of an Unstable Encounter Intermediate. Biochemistry 49(45):9882-90
Szilard RK, et al.  (2010) Systematic identification of fragile sites via genome-wide location analysis of gamma-H2AX. Nat Struct Mol Biol 17(3):299-305
Cui F and Zhurkin VB  (2009) Distinctive sequence patterns in metazoan and yeast nucleosomes: implications for linker histone binding to AT-rich and methylated DNA. Nucleic Acids Res 37(9):2818-29
Lambert JP, et al.  (2009) A novel proteomics approach for the discovery of chromatin-associated protein networks. Mol Cell Proteomics 8(4):870-82
Milani P, et al.  (2009) Nucleosome positioning by genomic excluding-energy barriers. Proc Natl Acad Sci U S A 106(52):22257-62
Scipioni A, et al.  (2009) A statistical thermodynamic approach for predicting the sequence-dependent nucleosome positioning along genomes. Biopolymers 91(12):1143-53
Visnapuu ML and Greene EC  (2009) Single-molecule imaging of DNA curtains reveals intrinsic energy landscapes for nucleosome deposition. Nat Struct Mol Biol 16(10):1056-62
Xin H, et al.  (2009) yFACT induces global accessibility of nucleosomal DNA without H2A-H2B displacement. Mol Cell 35(3):365-76
Zhang Y, et al.  (2009) Intrinsic histone-DNA interactions are not the major determinant of nucleosome positions in vivo. Nat Struct Mol Biol 16(8):847-52
Sinha M and Peterson CL  (2008) A Rad51 presynaptic filament is sufficient to capture nucleosomal homology during recombinational repair of a DNA double-strand break. Mol Cell 30(6):803-10
Kim JA, et al.  (2007) Heterochromatin is refractory to gamma-H2AX modification in yeast and mammals. J Cell Biol 178(2):209-18
Peckham HE, et al.  (2007) Nucleosome positioning signals in genomic DNA. Genome Res 17(8):1170-7
Tardiff DF, et al.  (2007) Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking. Proc Natl Acad Sci U S A 104(50):19948-53
Bondarenko VA, et al.  (2006) Nucleosomes can form a polar barrier to transcript elongation by RNA polymerase II. Mol Cell 24(3):469-79
Li W, et al.  (2006) Brownian dynamics simulation of directional sliding of histone octamers caused by DNA bending. Phys Rev E Stat Nonlin Soft Matter Phys 73(5 Pt 1):051909
Schmid M, et al.  (2006) Nup-PI: the nucleopore-promoter interaction of genes in yeast. Mol Cell 21(3):379-91
Zanton SJ and Pugh BF  (2006) Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock. Genes Dev 20(16):2250-65