HHF1/YBR009C Literature Guide Help

Other names published for HHF1: YBR009C

HHF1 - Protein-Nucleic Acid Interactions (56)

ReferenceOther Genes Addressed
Cesarini E, et al.  (2012) H4K16 acetylation affects recombination and ncRNA transcription at rDNA in Saccharomyces cerevisiae. Mol Biol Cell 23(14):2770-81
Chavez MS, et al.  (2012) The conformational flexibility of the C-terminus of histone H4 promotes histone octamer and nucleosome stability and yeast viability. Epigenetics Chromatin 5(1):5
Galdieri L and Vancura A  (2012) Acetyl-CoA carboxylase regulates global histone acetylation. J Biol Chem 287(28):23865-76
Liang D, et al.  (2012) Histone dosage regulates DNA damage sensitivity in a checkpoint-independent manner by the homologous recombination pathway. Nucleic Acids Res 40(19):9604-20
Zunder RM and Rine J  (2012) Direct interplay among histones, histone chaperones, and a chromatin boundary protein in the control of histone gene expression. Mol Cell Biol 32(21):4337-49
Arnone JT and McAlear MA  (2011) Adjacent Gene Pairing Plays a Role in the Coordinated Expression of Ribosome Biogenesis Genes MPP10 and YJR003C in Saccharomyces cerevisiae. Eukaryot Cell 10(1):43-53
Bintu L, et al.  (2011) The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.LID - 10.1038/nsmb.2164 [doi] Nat Struct Mol Biol ()
Cole HA, et al.  (2011) Activation-induced disruption of nucleosome position clusters on the coding regions of Gcn4-dependent genes extends into neighbouring genes. Nucleic Acids Res 39(22):9521-35
Gaykalova DA, et al.  (2011) A polar barrier to transcription can be circumvented by remodeler-induced nucleosome translocation. Nucleic Acids Res 39(9):3520-8
Houghtaling S, et al.  (2011) Molecular assays to investigate chromatin changes during DNA double-strand break repair in yeast. Methods Mol Biol 745():79-97
Ivanovska I, et al.  (2011) Control of chromatin structure by spt6: different consequences in coding and regulatory regions. Mol Cell Biol 31(3):531-41
Katan-Khaykovich Y and Struhl K  (2011) Splitting of H3-H4 tetramers at transcriptionally active genes undergoing dynamic histone exchange. Proc Natl Acad Sci U S A 108(4):1296-301
Kingston IJ, et al.  (2011) Biophysical Characterization of the Centromere-specific Nucleosome from Budding Yeast. J Biol Chem 286(5):4021-6
Masumoto H, et al.  (2011) The Inheritance of Histone Modifications Depends upon the Location in the Chromosome in Saccharomyces cerevisiae. PLoS One 6(12):e28980
Wittner M, et al.  (2011) Establishment and maintenance of alternative chromatin States at a multicopy gene locus. Cell 145(4):543-54
Yu Y, et al.  (2011) A conserved patch near the C terminus of histone H4 is required for genome stability in budding yeast. Mol Cell Biol 31(11):2311-25
Andrews AJ, et al.  (2010) The histone chaperone Nap1 promotes nucleosome assembly by eliminating nonnucleosomal histone DNA interactions. Mol Cell 37(6):834-42
Drouin S, et al.  (2010) DSIF and RNA Polymerase II CTD Phosphorylation Coordinate the Recruitment of Rpd3S to Actively Transcribed Genes. PLoS Genet 6(10):e1001173
Govin J, et al.  (2010) Genome-wide mapping of histone H4 serine-1 phosphorylation during sporulation in Saccharomyces cerevisiae. Nucleic Acids Res 38(14):4599-606
Grably M and Engelberg D  (2010) A Detailed Protocol for Chromatin Immunoprecipitation in the Yeast Saccharomyces cerevisiae. Methods Mol Biol 638():211-24
Ogawa R, et al.  (2010) Computational prediction of nucleosome positioning by calculating the relative fragment frequency index of nucleosomal sequences. FEBS Lett 584(8):1498-502
Pattenden SG, et al.  (2010) Features of cryptic promoters and their varied reliance on bromodomain-containing factors. PLoS One 5(9):e12927
Xu F, et al.  (2010) Long-range effects of histone point mutations on DNA remodeling revealed from computational analyses of SIN-mutant nucleosome structures. Nucleic Acids Res 38(20):6872-82
Zhou BO, et al.  (2010) SWR1 complex poises heterochromatin boundaries for antisilencing activity propagation. Mol Cell Biol 30(10):2391-400
Gradolatto A, et al.  (2009) A noncanonical bromodomain in the AAA ATPase protein Yta7 directs chromosomal positioning and barrier chromatin activity. Mol Cell Biol 29(17):4604-11
Milani P, et al.  (2009) Nucleosome positioning by genomic excluding-energy barriers. Proc Natl Acad Sci U S A 106(52):22257-62
Scipioni A, et al.  (2009) A statistical thermodynamic approach for predicting the sequence-dependent nucleosome positioning along genomes. Biopolymers 91(12):1143-53
Sperling AS and Grunstein M  (2009) Histone H3 N-terminus regulates higher order structure of yeast heterochromatin. Proc Natl Acad Sci U S A 106(32):13153-9
Takahata S, et al.  (2009) FACT and Asf1 regulate nucleosome dynamics and coactivator binding at the HO promoter. Mol Cell 34(4):405-15
Visnapuu ML and Greene EC  (2009) Single-molecule imaging of DNA curtains reveals intrinsic energy landscapes for nucleosome deposition. Nat Struct Mol Biol 16(10):1056-62