SWI4/YER111C Literature Guide Help

Other names published for SWI4: ART1, YER111C

SWI4 - Protein-Nucleic Acid Interactions (39)

Results: 1 - 30 of 39 records
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ReferenceOther Genes Addressed
Bastos de Oliveira FM, et al.  (2012) Linking DNA replication checkpoint to MBF cell-cycle transcription reveals a distinct class of G1/S genes. EMBO J 31(7):1798-810
Hansen L, et al.  (2012) Differences in local genomic context of bound and unbound motifs. Gene 506(1):125-34
Eriksson PR, et al.  (2011) Spt10 and Swi4 Control the Timing of Histone H2A/H2B Gene Activation in Budding Yeast. Mol Cell Biol 31(3):557-72
Guan Y, et al.  (2011) Nucleosome-coupled expression differences in closely-related species. BMC Genomics 12(1):466
Pan J, et al.  (2011) A Hierarchical Combination of Factors Shapes the Genome-wide Topography of Yeast Meiotic Recombination Initiation. Cell 144(5):719-31
Takahata S, et al.  (2011) Repressive chromatin affects factor binding at yeast HO (homothallic switching) promoter. J Biol Chem 286(40):34809-19
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Bai L, et al.  (2010) Nucleosome-depleted regions in cell-cycle-regulated promoters ensure reliable gene expression in every cell cycle. Dev Cell 18(4):544-55
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
Kahana S, et al.  (2010) Functional Dissection of IME1 Transcription Using Quantitative Promoter-Reporter Screening. Genetics 186(3):829-41
Schulze JM, et al.  (2009) Linking cell cycle to histone modifications: SBF and H2B monoubiquitination machinery and cell-cycle regulation of H3K79 dimethylation. Mol Cell 35(5):626-41
Swamy KB, et al.  (2009) Impact of DNA-binding position variants on yeast gene expression. Nucleic Acids Res 37(21):6991-7001
Takahata S, et al.  (2009) The E2F functional analogue SBF recruits the Rpd3(L) HDAC, via Whi5 and Stb1, and the FACT chromatin reorganizer, to yeast G1 cyclin promoters. EMBO J 28(21):3378-89
Ye C, et al.  (2009) Using network component analysis to dissect regulatory networks mediated by transcription factors in yeast. PLoS Comput Biol 5(3):e1000311
Lu CC, et al.  (2008) Extracting transcription factor binding sites from unaligned gene sequences with statistical models. BMC Bioinformatics 9 Suppl 12:S7
Chua G, et al.  (2006) Identifying transcription factor functions and targets by phenotypic activation. Proc Natl Acad Sci U S A 103(32):12045-50
Workman CT, et al.  (2006) A systems approach to mapping DNA damage response pathways. Science 312(5776):1054-9
Yu X, et al.  (2006) Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae. Nucleic Acids Res 34(3):917-27
de Bruin RA, et al.  (2006) Constraining G1-specific transcription to late G1 phase: the MBF-associated corepressor Nrm1 acts via negative feedback. Mol Cell 23(4):483-96
Bean JM, et al.  (2005) High functional overlap between MluI cell-cycle box binding factor and Swi4/6 cell-cycle box binding factor in the G1/S transcriptional program in Saccharomyces cerevisiae. Genetics 171(1):49-61
Bernstein BE, et al.  (2004) Global nucleosome occupancy in yeast. Genome Biol 5(9):R62
Chen G, et al.  (2004) Transcription factor binding element detection using functional clustering of mutant expression data. Nucleic Acids Res 32(8):2362-71
Costanzo M, et al.  (2004) CDK activity antagonizes Whi5, an inhibitor of G1/S transcription in yeast. Cell 117(7):899-913
Garcia R, et al.  (2004) The global transcriptional response to transient cell wall damage in Saccharomyces cerevisiae and its regulation by the cell integrity signaling pathway. J Biol Chem 279(15):15183-95
Kepes F  (2003) Periodic epi-organization of the yeast genome revealed by the distribution of promoter sites. J Mol Biol 329(5):859-65
Lagorce A, et al.  (2003) Genome-wide analysis of the response to cell wall mutations in the yeast Saccharomyces cerevisiae. J Biol Chem 278(22):20345-57
Betz JL, et al.  (2002) Phenotypic analysis of Paf1/RNA polymerase II complex mutations reveals connections to cell cycle regulation, protein synthesis, and lipid and nucleic acid metabolism. Mol Genet Genomics 268(2):272-85
Pramila T, et al.  (2002) Conserved homeodomain proteins interact with MADS box protein Mcm1 to restrict ECB-dependent transcription to the M/G1 phase of the cell cycle. Genes Dev 16(23):3034-45
Baetz K, et al.  (2001) Transcriptional coregulation by the cell integrity mitogen-activated protein kinase Slt2 and the cell cycle regulator Swi4. Mol Cell Biol 21(19):6515-28
Iyer VR, et al.  (2001) Genomic binding sites of the yeast cell-cycle transcription factors SBF and MBF. Nature 409(6819):533-8
Results: 1 - 30 of 39 records
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