HMLALPHA2/YCL067C Literature Guide Help

Other names published for HMLALPHA2: ALPHA2, YCL067C

HMLALPHA2 - Protein-Nucleic Acid Interactions (49)

ReferenceOther Genes Addressed
Mathias JR, et al.  (2004) Repression of the yeast HO gene by the MATalpha2 and MATa1 homeodomain proteins. Nucleic Acids Res 32(22):6469-78
Nagaraj VH, et al.  (2004) Combined analysis of expression data and transcription factor binding sites in the yeast genome. BMC Genomics 5(1):59
Kegel A, et al.  (2001) Nej1p, a cell type-specific regulator of nonhomologous end joining in yeast. Curr Biol 11(20):1611-7
Mathias JR, et al.  (2001) Altering the DNA-binding specificity of the yeast Matalpha 2 homeodomain protein. J Biol Chem 276(35):32696-703
Acton TB, et al.  (2000) Scanning mutagenesis of Mcm1: residues required for DNA binding, DNA bending, and transcriptional activation by a MADS-box protein. Mol Cell Biol 20(1):1-11
Anderson JS, et al.  (2000) Cooperative ordering in homeodomain-DNA recognition: solution structure and dynamics of the MATa1 homeodomain. Biochemistry 39(33):10045-54
Jin Y, et al.  (1999) The yeast a1 and alpha2 homeodomain proteins do not contribute equally to heterodimeric DNA binding. Mol Cell Biol 19(1):585-93
Stark MR, et al.  (1999) A trans-acting peptide activates the yeast a1 repressor by raising its DNA-binding affinity. EMBO J 18(6):1621-9
Li T, et al.  (1998) Crystal structure of the MATa1/MATalpha2 homeodomain heterodimer in complex with DNA containing an A-tract. Nucleic Acids Res 26(24):5707-18
Tan S and Richmond TJ  (1998) Crystal structure of the yeast MATalpha2/MCM1/DNA ternary complex. Nature 391(6668):660-6
Weiss K and Simpson RT  (1998) High-resolution structural analysis of chromatin at specific loci: Saccharomyces cerevisiae silent mating type locus HMLalpha. Mol Cell Biol 18(9):5392-403
Wu C, et al.  (1998) Mcm1 regulates donor preference controlled by the recombination enhancer in Saccharomyces mating-type switching. Genes Dev 12(11):1726-37
Carra JH and Privalov PL  (1997) Energetics of folding and DNA binding of the MAT alpha 2 homeodomain. Biochemistry 36(3):526-35
Komachi K and Johnson AD  (1997) Residues in the WD repeats of Tup1 required for interaction with alpha2. Mol Cell Biol 17(10):6023-8
Mukai Y, et al.  (1997) The role of cysteine residues in the homeodomain protein Mat alpha 2 in mating-type control of Saccharomyces cerevisiae. Mol Gen Genet 255(2):166-71
Reimer SK and Buchman AR  (1997) Yeast silencers create domains of nuclease-resistant chromatin in an SIR4-dependent manner. Chromosoma 106(3):136-48
Szeto L and Broach JR  (1997) Role of alpha2 protein in donor locus selection during mating type interconversion. Mol Cell Biol 17(2):751-9
Szeto L, et al.  (1997) Alpha2p controls donor preference during mating type interconversion in yeast by inactivating a recombinational enhancer of chromosome III. Genes Dev 11(15):1899-911
Weiss K and Simpson RT  (1997) Cell type-specific chromatin organization of the region that governs directionality of yeast mating type switching. EMBO J 16(14):4352-60
Zhong H and Vershon AK  (1997) The yeast homeodomain protein MATalpha2 shows extended DNA binding specificity in complex with Mcm1. J Biol Chem 272(13):8402-9
Mead J, et al.  (1996) The yeast alpha2 and Mcm1 proteins interact through a region similar to a motif found in homeodomain proteins of higher eukaryotes. Mol Cell Biol 16(5):2135-43
Redd MJ, et al.  (1996) Accessibility of alpha 2-repressed promoters to the activator Gal4. Mol Cell Biol 16(6):2865-9
Wolberger C  (1996) Homeodomain interactions. Curr Opin Struct Biol 6(1):62-8
Jin Y, et al.  (1995) Altered DNA recognition and bending by insertions in the alpha 2 tail of the yeast a1/alpha 2 homeodomain heterodimer. Science 270(5234):290-3
Li T, et al.  (1995) Crystal structure of the MATa1/MAT alpha 2 homeodomain heterodimer bound to DNA. Science 270(5234):262-9
Li T, et al.  (1995) Crystallization and preliminary X-ray diffraction studies of an a1/alpha 2/DNA ternary complex. Proteins 21(2):161-4
Smith DL, et al.  (1995) DNA bending by the a1 and alpha 2 homeodomain proteins from yeast. Nucleic Acids Res 23(7):1239-43
Herschbach BM, et al.  (1994) Transcriptional repression directed by the yeast alpha 2 protein in vitro. Nature 370(6487):309-11
Phillips CL, et al.  (1994) Heterodimerization of the yeast homeodomain transcriptional regulators alpha 2 and a1 induces an interfacial helix in alpha 2. Biochemistry 33(31):9294-302
Smith DL and Johnson AD  (1994) Operator-constitutive mutations in a DNA sequence recognized by a yeast homeodomain. EMBO J 13(10):2378-87