RPB8/YOR224C Literature Guide Help

Other names published for RPB8: ABC14.5, YOR224C

RPB8 - Omics (31)

ReferenceOther Genes Addressed
Cook KE and O'Shea EK  (2012) Hog1 Controls Global Reallocation of RNA Pol II upon Osmotic Shock in Saccharomyces cerevisiae. G3 (Bethesda) 2(9):1129-36
Fuchs SM, et al.  (2012) RNA polymerase II carboxyl-terminal domain phosphorylation regulates protein stability of the Set2 methyltransferase and histone H3 di- and trimethylation at lysine 36. J Biol Chem 287(5):3249-56
Gilmore JM, et al.  (2012) Characterization of a highly conserved histone related protein, Ydl156w, and its functional associations using quantitative proteomic analyses. Mol Cell Proteomics 11(4):M111.011544
Leducq JB, et al.  (2012) Evidence for the robustness of protein complexes to inter-species hybridization. PLoS Genet 8(12):e1003161
Smolle M, et al.  (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange. Nat Struct Mol Biol 19(9):884-92
Xie P  (2012) A dynamic model for processive transcription elongation and backtracking long pauses by multisubunit RNA polymerases. Proteins 80(8):2020-34
Chin CH, et al.  (2010) A hub-attachment based method to detect functional modules from confidence-scored protein interactions and expression profiles. BMC Bioinformatics 11 Suppl 1():S25
Fan X, et al.  (2010) Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation. Proc Natl Acad Sci U S A 107(42):17945-50
Feig M and Burton ZF  (2010) RNA polymerase II flexibility during translocation from normal mode analysis. Proteins 78(2):434-46
Feig M and Burton ZF  (2010) RNA polymerase II with open and closed trigger loops: active site dynamics and nucleic acid translocation. Biophys J 99(8):2577-86
Looke M, et al.  (2010) Relicensing of transcriptionally inactivated replication origins in budding yeast. J Biol Chem 285(51):40004-11
Mayer A, et al.  (2010) Uniform transitions of the general RNA polymerase II transcription complex. Nat Struct Mol Biol 17(10):1272-8
Poorey K, et al.  (2010) RNA synthesis precision is regulated by preinitiation complex turnover. Genome Res 20(12):1679-88
Chen AK, et al.  (2009) Response of Saccharomyces cerevisiae to stress-free acidification. J Microbiol 47(1):1-8
Hodges C, et al.  (2009) Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II. Science 325(5940):626-8
Lefrancois P, et al.  (2009) Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing. BMC Genomics 10:37
Li L, et al.  (2009) Budding yeast SSD1-V regulates transcript levels of many longevity genes and extends chronological life span in purified quiescent cells. Mol Biol Cell 20(17):3851-64
Mosley AL, et al.  (2009) Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation. Mol Cell 34(2):168-78
Singh N, et al.  (2009) The Ess1 prolyl isomerase is required for transcription termination of small noncoding RNAs via the Nrd1 pathway. Mol Cell 36(2):255-66
Tavenet A, et al.  (2009) Genome-wide location analysis reveals a role for Sub1 in RNA polymerase III transcription. Proc Natl Acad Sci U S A 106(34):14265-70
Zhang KX and Ouellette BF  (2009) GAIA: a gram-based interaction analysis tool--an approach for identifying interacting domains in yeast. BMC Bioinformatics 10 Suppl 1:S60
Levy A, et al.  (2008) Yeast linker histone Hho1p is required for efficient RNA polymerase I processivity and transcriptional silencing at the ribosomal DNA. Proc Natl Acad Sci U S A 105(33):11703-8
Soragni E and Kassavetis GA  (2008) Absolute Gene Occupancies by RNA Polymerase III, TFIIIB, and TFIIIC in Saccharomyces cerevisiae. J Biol Chem 283(39):26568-76
Tardiff DF, et al.  (2007) Protein characterization of Saccharomyces cerevisiae RNA polymerase II after in vivo cross-linking. Proc Natl Acad Sci U S A 104(50):19948-53
Blake WJ, et al.  (2006) Phenotypic consequences of promoter-mediated transcriptional noise. Mol Cell 24(6):853-65
Jothi R, et al.  (2006) Co-evolutionary Analysis of Domains in Interacting Proteins Reveals Insights into Domain-Domain Interactions Mediating Protein-Protein Interactions. J Mol Biol 362(4):861-75
Kresnowati MT, et al.  (2006) When transcriptome meets metabolome: fast cellular responses of yeast to sudden relief of glucose limitation. Mol Syst Biol 2():49
Laferte A, et al.  (2006) The transcriptional activity of RNA polymerase I is a key determinant for the level of all ribosome components. Genes Dev 20(15):2030-40
Oficjalska-Pham D, et al.  (2006) General repression of RNA polymerase III transcription is triggered by protein phosphatase type 2A-mediated dephosphorylation of Maf1. Mol Cell 22(5):623-32
Wu X, et al.  (2006) Prediction of yeast protein-protein interaction network: insights from the Gene Ontology and annotations. Nucleic Acids Res 34(7):2137-50