RRP6/YOR001W Literature Guide Help

Other names published for RRP6: YOR001W

RRP6 - Omics (39)

ReferenceOther Genes Addressed
Garre E, et al.  (2013) Nonsense-Mediated mRNA Decay Controls the Changes in Yeast Ribosomal Protein Pre-mRNAs Levels upon Osmotic Stress. PLoS One 8(4):e61240
Gudipati RK, et al.  (2012) Extensive degradation of RNA precursors by the exosome in wild-type cells. Mol Cell 48(3):409-21
Schmid M, et al.  (2012) Rrp6p controls mRNA poly(A) tail length and its decoration with poly(A) binding proteins. Mol Cell 47(2):267-80
Schneider C, et al.  (2012) Transcriptome-wide analysis of exosome targets. Mol Cell 48(3):422-33
Bergkessel M, et al.  (2011) Diverse environmental stresses elicit distinct responses at the level of pre-mRNA processing in yeast. RNA 17(8):1461-78
Lardenois A, et al.  (2011) Execution of the meiotic noncoding RNA expression program and the onset of gametogenesis in yeast require the conserved exosome subunit Rrp6. Proc Natl Acad Sci U S A 108(3):1058-63
Li B, et al.  (2011) Understanding and predicting synthetic lethal genetic interactions in Saccharomyces cerevisiae using domain genetic interactions. BMC Syst Biol 5(1):73
Ma P and Xia X  (2011) Factors affecting splicing strength of yeast genes. Comp Funct Genomics 2011():212146
Smith SB, et al.  (2011) Pronounced and extensive microtubule defects in a Saccharomyces cerevisiae DIS3 mutant. Yeast 28(11):755-69
Toesca I, et al.  (2011) Cryptic transcription mediates repression of subtelomeric metal homeostasis genes. PLoS Genet 7(6):e1002163
Yassour M, et al.  (2010) Strand-specific RNA sequencing reveals extensive regulated long antisense transcripts that are conserved across yeast species. Genome Biol 11(8):R87
Zheng J, et al.  (2010) Epistatic relationships reveal the functional organization of yeast transcription factors. Mol Syst Biol 6():420
Fujii K, et al.  (2009) A role for ubiquitin in the clearance of nonfunctional rRNAs. Genes Dev 23(8):963-74
Ghazal G, et al.  (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109
Holbein S, et al.  (2009) Cordycepin interferes with 3' end formation in yeast independently of its potential to terminate RNA chain elongation. RNA 15(5):837-49
Xu Z, et al.  (2009) Bidirectional promoters generate pervasive transcription in yeast. Nature 457(7232):1033-7
Gustavsson M and Ronne H  (2008) Evidence that tRNA modifying enzymes are important in vivo targets for 5-fluorouracil in yeast. RNA 14(4):666-74
Huang B, et al.  (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA 14(10):2183-94
Ito T, et al.  (2008) Unexpected complexity of the budding yeast transcriptome. IUBMB Life 60(12):775-81
Lee A, et al.  (2008) Novel low abundance and transient RNAs in yeast revealed by tiling microarrays and ultra high-throughput sequencing are not conserved across closely related yeast species. PLoS Genet 4(12):e1000299
Nishizawa M, et al.  (2008) Nutrient-Regulated Antisense and Intragenic RNAs Modulate a Signal Transduction Pathway in Yeast. PLoS Biol 6(12):e326
Vodala S, et al.  (2008) The nuclear exosome and adenylation regulate posttranscriptional tethering of yeast GAL genes to the nuclear periphery. Mol Cell 31(1):104-13
Wilmes GM, et al.  (2008) A genetic interaction map of RNA-processing factors reveals links between Sem1/Dss1-containing complexes and mRNA export and splicing. Mol Cell 32(5):735-46
Abruzzi K, et al.  (2007) A novel plasmid-based microarray screen identifies suppressors of rrp6Delta in Saccharomyces cerevisiae. Mol Cell Biol 27(3):1044-55
Pleiss JA, et al.  (2007) Rapid, transcript-specific changes in splicing in response to environmental stress. Mol Cell 27(6):928-37
Arigo JT, et al.  (2006) Termination of cryptic unstable transcripts is directed by yeast RNA-binding proteins Nrd1 and Nab3. Mol Cell 23(6):841-51
Daniel JA, et al.  (2006) Diverse functions of spindle assembly checkpoint genes in Saccharomyces cerevisiae. Genetics 172(1):53-65
Davis CA and Ares M Jr  (2006) Accumulation of unstable promoter-associated transcripts upon loss of the nuclear exosome subunit Rrp6p in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 103(9):3262-7
Houalla R, et al.  (2006) Microarray detection of novel nuclear RNA substrates for the exosome. Yeast 23(6):439-54
Moore MJ, et al.  (2006) Differential recruitment of the splicing machinery during transcription predicts genome-wide patterns of mRNA splicing. Mol Cell 24(6):903-15