RPD3/YNL330C Literature Guide Help

Other names published for RPD3: REC3, SDI2, SDS6, MOF6, YNL330C

RPD3 - Omics (73)

ReferenceOther Genes Addressed
Azad GK, et al.  (2013) Depletion of Cellular Iron by Curcumin Leads to Alteration in Histone Acetylation and Degradation of Sml1p in Saccharomyces cerevisiae. PLoS One 8(3):e59003
Chen M, et al.  (2013) Decoupling Epigenetic and Genetic Effects through Systematic Analysis of Gene Position. Cell Rep 3(1):128-37
Lu JY, et al.  (2013) Using functional proteome microarrays to study protein lysine acetylation. Methods Mol Biol 981():151-65
Worley J, et al.  (2013) Inositol Pyrophosphates Regulate Cell Growth and the Environmental Stress Response by Activating the HDAC Rpd3L. Cell Rep ()
Bryant JM, et al.  (2012) The linker histone plays a dual role during gametogenesis in Saccharomyces cerevisiae. Mol Cell Biol 32(14):2771-83
Cesarini E, et al.  (2012) H4K16 acetylation affects recombination and ncRNA transcription at rDNA in Saccharomyces cerevisiae. Mol Biol Cell 23(14):2770-81
Gilmore JM, et al.  (2012) Characterization of a highly conserved histone related protein, Ydl156w, and its functional associations using quantitative proteomic analyses. Mol Cell Proteomics 11(4):M111.011544
Grigat M, et al.  (2012) Multiple histone deacetylases are recruited by corepressor Sin3 and contribute to gene repression mediated by Opi1 regulator of phospholipid biosynthesis in the yeast Saccharomyces cerevisiae. Mol Genet Genomics 287(6):461-72
Henriksen P, et al.  (2012) Proteome-wide analysis of lysine acetylation suggests its broad regulatory scope in Saccharomyces cerevisiae. Mol Cell Proteomics 11(11):1510-22
Kaluarachchi Duffy S, et al.  (2012) Exploring the yeast acetylome using functional genomics. Cell 149(4):936-48
Lanza AM, et al.  (2012) Linking yeast Gcn5p catalytic function and gene regulation using a quantitative, graded dominant mutant approach. PLoS One 7(4):e36193
Poschke H, et al.  (2012) Rif2 Promotes a Telomere Fold-Back Structure through Rpd3L Recruitment in Budding Yeast. PLoS Genet 8(9):e1002960
Schreiber TB, et al.  (2012) Global analysis of phosphoproteome regulation by the Ser/Thr phosphatase Ppt1 in Saccharomyces cerevisiae. J Proteome Res 11(4):2397-408
Smolle M, et al.  (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange. Nat Struct Mol Biol 19(9):884-92
Weinberger L, et al.  (2012) Expression noise and acetylation profiles distinguish HDAC functions. Mol Cell 47(2):193-202
Castells-Roca L, et al.  (2011) Heat shock response in yeast involves changes in both transcription rates and mRNA stabilities. PLoS One 6(2):e17272
Ding S and Wang W  (2011) Recipes and mechanisms of cellular reprogramming: a case study on budding yeast Saccharomyces cerevisiae. BMC Syst Biol 5(1):50
Huber A, et al.  (2011) Sch9 regulates ribosome biogenesis via Stb3, Dot6 and Tod6 and the histone deacetylase complex RPD3L.LID - 10.1038/emboj.2011.221 [doi] EMBO J ()
Lenstra TL, et al.  (2011) The specificity and topology of chromatin interaction pathways in yeast. Mol Cell 42(4):536-49
Reid RJ, et al.  (2011) Selective ploidy ablation, a high-throughput plasmid transfer protocol, identifies new genes affecting topoisomerase I-induced DNA damage. Genome Res 21(3):477-86
Ryan C, et al.  (2011) Improved functional overview of protein complexes using inferred epistatic relationships. BMC Syst Biol 5(1):80
Terzi N, et al.  (2011) H3K4 trimethylation by Set1 promotes efficient termination by the Nrd1-Nab3-Sen1 pathway. Mol Cell Biol 31(17):3569-83
Toesca I, et al.  (2011) Cryptic transcription mediates repression of subtelomeric metal homeostasis genes. PLoS Genet 7(6):e1002163
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
Zakrzewska A, et al.  (2011) Genome-wide analysis of yeast stress survival and tolerance acquisition to analyze the central trade-off between growth rate and cellular robustness. Mol Biol Cell 22(22):4435-46
Drouin S, et al.  (2010) DSIF and RNA Polymerase II CTD Phosphorylation Coordinate the Recruitment of Rpd3S to Actively Transcribed Genes. PLoS Genet 6(10):e1001173
Ehrentraut S, et al.  (2010) Rpd3-dependent boundary formation at telomeres by removal of Sir2 substrate. Proc Natl Acad Sci U S A 107(12):5522-7
Liko D, et al.  (2010) Stb3 Plays a Role in the Glucose-Induced Transition from Quiescence to Growth in Saccharomyces cerevisiae. Genetics 185(3):797-810
On T, et al.  (2010) The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses. Proteins 78(9):2075-89
Ruiz-Roig C, et al.  (2010) The Rpd3L HDAC complex is essential for the heat stress response in yeast. Mol Microbiol 76(4):1049-62