HDA1/YNL021W Literature Guide Help

Other names published for HDA1: YNL021W

HDA1 - Omics (30)

ReferenceOther Genes Addressed
Fuchs SM, et al.  (2012) RNA polymerase II carboxyl-terminal domain phosphorylation regulates protein stability of the Set2 methyltransferase and histone H3 di- and trimethylation at lysine 36. J Biol Chem 287(5):3249-56
Grigat M, et al.  (2012) Multiple histone deacetylases are recruited by corepressor Sin3 and contribute to gene repression mediated by Opi1 regulator of phospholipid biosynthesis in the yeast Saccharomyces cerevisiae. Mol Genet Genomics 287(6):461-72
Kaluarachchi Duffy S, et al.  (2012) Exploring the yeast acetylome using functional genomics. Cell 149(4):936-48
Poschke H, et al.  (2012) Rif2 Promotes a Telomere Fold-Back Structure through Rpd3L Recruitment in Budding Yeast. PLoS Genet 8(9):e1002960
Weiner A, et al.  (2012) Systematic dissection of roles for chromatin regulators in a yeast stress response. PLoS Biol 10(7):e1001369
Zelin E, et al.  (2012) The p23 molecular chaperone and GCN5 acetylase jointly modulate protein-DNA dynamics and open chromatin status. Mol Cell 48(3):459-70
Guillemette B, et al.  (2011) H3 lysine 4 is acetylated at active gene promoters and is regulated by h3 lysine 4 methylation. PLoS Genet 7(3):e1001354
Jung PP, et al.  (2011) Ploidy influences cellular responses to gross chromosomal rearrangements in Saccharomyces cerevisiae. BMC Genomics 12(1):331
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
Bandyopadhyay S, et al.  (2010) Rewiring of genetic networks in response to DNA damage. Science 330(6009):1385-9
Libuda DE and Winston F  (2010) Alterations in DNA replication and histone levels promote histone gene amplification in Saccharomyces cerevisiae. Genetics 184(4):985-97
Mehta M, et al.  (2010) Individual Lysine Acetylations on the N Terminus of Saccharomyces cerevisiae H2A.Z Are Highly but Not Differentially Regulated. J Biol Chem 285(51):39855-65
On T, et al.  (2010) The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses. Proteins 78(9):2075-89
Lin YY, et al.  (2009) Protein acetylation microarray reveals that NuA4 controls key metabolic target regulating gluconeogenesis. Cell 136(6):1073-84
Herrero AB, et al.  (2008) Levels of SCS7/FA2H-Mediated Fatty Acid 2-Hydroxylation Determine the Sensitivity of Cells to Antitumor PM02734. Cancer Res 68(23):9779-87
Lin YY, et al.  (2008) A comprehensive synthetic genetic interaction network governing yeast histone acetylation and deacetylation. Genes Dev 22(15):2062-74
Ruotolo R, et al.  (2008) Membrane transporters and protein traffic networks differentially affecting metal tolerance: a genomic phenotyping study in yeast. Genome Biol 9(4):R67
Tan K, et al.  (2008) A systems approach to delineate functions of paralogous transcription factors: role of the Yap family in the DNA damage response. Proc Natl Acad Sci U S A 105(8):2934-9
Buck MJ and Lieb JD  (2006) A chromatin-mediated mechanism for specification of conditional transcription factor targets. Nat Genet 38(12):1446-51
Burhans DT, et al.  (2006) Non-random clustering of stress-related genes during evolution of the S. cerevisiae genome. BMC Evol Biol 6():58
Crisp RJ, et al.  (2006) Recruitment of Tup1p and Cti6p regulates heme-deficient expression of Aft1p target genes. EMBO J 25(3):512-21
Hansen KR, et al.  (2005) Global effects on gene expression in fission yeast by silencing and RNA interference machineries. Mol Cell Biol 25(2):590-601
Green SR and Johnson AD  (2004) Promoter-dependent roles for the Srb10 cyclin-dependent kinase and the Hda1 deacetylase in Tup1-mediated repression in Saccharomyces cerevisiae. Mol Biol Cell 15(9):4191-202
Humphrey EL, et al.  (2004) Rpd3p relocation mediates a transcriptional response to rapamycin in yeast. Chem Biol 11(3):295-9
Lu P, et al.  (2003) Expression deconvolution: a reinterpretation of DNA microarray data reveals dynamic changes in cell populations. Proc Natl Acad Sci U S A 100(18):10370-5
Begley TJ, et al.  (2002) Damage recovery pathways in Saccharomyces cerevisiae revealed by genomic phenotyping and interactome mapping. Mol Cancer Res 1(2):103-12
Bernstein BE, et al.  (2002) Methylation of histone H3 Lys 4 in coding regions of active genes. Proc Natl Acad Sci U S A 99(13):8695-700
Briza P, et al.  (2002) Systematic analysis of sporulation phenotypes in 624 non-lethal homozygous deletion strains of Saccharomyces cerevisiae. Yeast 19(5):403-22
Robyr D, et al.  (2002) Microarray deacetylation maps determine genome-wide functions for yeast histone deacetylases. Cell 109(4):437-46
Bernstein BE, et al.  (2000) Genomewide studies of histone deacetylase function in yeast. Proc Natl Acad Sci U S A 97(25):13708-13