TRA1/YHR099W Literature Guide Help

Other names published for TRA1: YHR099W

TRA1 - Omics (26)

ReferenceOther Genes Addressed
Lu JY, et al.  (2013) Using functional proteome microarrays to study protein lysine acetylation. Methods Mol Biol 981():151-65
Mitchell L, et al.  (2013) mChIP-KAT-MS, a method to map protein interactions and acetylation sites for lysine acetyltransferases. Proc Natl Acad Sci U S A 110(17):E1641-50
Kvas S, et al.  (2012) Loss of nonsense mediated decay suppresses mutations in Saccharomyces cerevisiae TRA1. BMC Genet 13(1):19
Miller C, et al.  (2012) Mediator phosphorylation prevents stress response transcription during non-stress conditions. J Biol Chem 287(53):44017-26
Arroyo J, et al.  (2011) Functional and genomic analyses of blocked protein O-mannosylation in baker's yeast. Mol Microbiol 79(6):1529-46
Josse L, et al.  (2011) Transcriptomic and phenotypic analysis of the effects of T-2 toxin on Saccharomyces cerevisiae: evidence of mitochondrial involvement. FEMS Yeast Res 11(1):133-50
Knutson BA and Hahn S  (2011) Domains of Tra1 Important for Activator Recruitment and Transcription Coactivator Functions of SAGA and NuA4 Complexes. Mol Cell Biol 31(4):818-831
Lee KK, et al.  (2011) Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes. Mol Syst Biol 7():503
Stirling PC, et al.  (2011) The Complete Spectrum of Yeast Chromosome Instability Genes Identifies Candidate CIN Cancer Genes and Functional Roles for ASTRA Complex Components. PLoS Genet 7(4):e1002057
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
Wilson MA, et al.  (2011) Ubp8 and SAGA regulate Snf1 AMP kinase activity. Mol Cell Biol 31(15):3126-35
Breitkreutz A, et al.  (2010) A global protein kinase and phosphatase interaction network in yeast. Science 328(5981):1043-6
Hoke SM, et al.  (2010) Mutational analysis of the C-terminal FATC domain of Saccharomyces cerevisiae Tra1. Curr Genet 56(5):447-65
Li M, et al.  (2010) Identifying the overlapping complexes in protein interaction networks. Int J Data Min Bioinform 4(1):91-108
On T, et al.  (2010) The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses. Proteins 78(9):2075-89
Teytelman L, et al.  (2009) Impact of chromatin structures on DNA processing for genomic analyses. PLoS One 4(8):e6700
van Werven FJ, et al.  (2009) Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome. Nat Struct Mol Biol 16(10):1043-8
Arnett DR, et al.  (2008) A proteomics analysis of yeast Mot1p protein-protein associations: insights into mechanism. Mol Cell Proteomics 7(11):2090-106
Hoke SM, et al.  (2008) A conserved central region of yeast ada2 regulates the histone acetyltransferase activity of gcn5 and interacts with phospholipids. J Mol Biol 384(4):743-55
Hoke SM, et al.  (2008) Systematic genetic array analysis links the Saccharomyces cerevisiae SAGA/SLIK and NuA4 component Tra1 to multiple cellular processes. BMC Genet 9:46
Chang EJ, et al.  (2007) Prediction of cyclin-dependent kinase phosphorylation substrates. PLoS One 2(7):e656
Miranda-Saavedra D and Barton GJ  (2007) Classification and functional annotation of eukaryotic protein kinases. Proteins 68(4):893-914
Mutiu AI, et al.  (2007) Structure/Function analysis of the phosphatidylinositol-3-kinase domain of yeast tra1. Genetics 177(1):151-66
Swaminathan S, et al.  (2006) Rck2 is required for reprogramming of ribosomes during oxidative stress. Mol Biol Cell 17(3):1472-82
Kobor MS, et al.  (2004) A protein complex containing the conserved Swi2/Snf2-related ATPase Swr1p deposits histone variant H2A.Z into euchromatin. PLoS Biol 2(5):E131
Dziak R, et al.  (2003) Evidence for a role of MCM (mini-chromosome maintenance)5 in transcriptional repression of sub-telomeric and Ty-proximal genes in Saccharomyces cerevisiae. J Biol Chem 278(30):27372-81