tD(GUC)D Literature Guide Help

tD(GUC)D Literature Curation Summary

Curated References for tD(GUC)D: 44

Date of last curation: 2013-01-28

Results: 1 - 30 of 44 records
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ReferenceOther Genes Addressed
Iben JR and Maraia RJ  (2012) tRNAomics: tRNA gene copy number variation and codon use provide bioinformatic evidence of a new anticodon:codon wobble pair in a eukaryote. RNA 18(7):1358-72
Qi X, et al.  (2012) Retrotransposon profiling of RNA polymerase III initiation sites. Genome Res 22(4):681-92
Yukawa Y, et al.  (2011) A common sequence motif involved in selection of transcription start sites of Arabidopsis and budding yeast tRNA genes. Genomics 97(3):166-72
Hopper AK, et al.  (2010) Cellular dynamics of tRNAs and their genes. FEBS Lett 584(2):310-7
Ouameur AA, et al.  (2010) Probing tRNA interaction with biogenic polyamines. RNA 16(10):1968-79
Chan PP and Lowe TM  (2009) GtRNAdb: a database of transfer RNA genes detected in genomic sequence. Nucleic Acids Res 37(Database issue):D93-7
Li Y and Zhou H  (2009) tRNAs as regulators in gene expression. Sci China C Life Sci 52(3):245-52
Ozanick SG, et al.  (2009) Rex1p deficiency leads to accumulation of precursor initiator tRNAMet and polyadenylation of substrate RNAs in Saccharomyces cerevisiae. Nucleic Acids Res 37(1):298-308
Zaborske JM, et al.  (2009) Genome-wide Analysis of tRNA Charging and Activation of the eIF2 Kinase Gcn2p. J Biol Chem 284(37):25254-67
Thompson DM, et al.  (2008) tRNA cleavage is a conserved response to oxidative stress in eukaryotes. RNA 14(10):2095-103
Wang B, et al.  (2008) Complex Ligand-Induced Conformational Changes in tRNA(Asp) Revealed by Single-Nucleotide Resolution SHAPE Chemistry. Biochemistry 47(11):3454-61
Ciesla M, et al.  (2007) Maf1 Is Involved in Coupling Carbon Metabolism to RNA Polymerase III Transcription. Mol Cell Biol 27(21):7693-702
Jako E, et al.  (2007) In silico detection of tRNA sequence features characteristic to aminoacyl-tRNA synthetase class membership. Nucleic Acids Res 35(16):5593-609
Muller S, et al.  (2007) Identification of determinants in the protein partners aCBF5 and aNOP10 necessary for the tRNA:Psi55-synthase and RNA-guided RNA:Psi-synthase activities. Nucleic Acids Res 35(16):5610-24
Goodenbour JM and Pan T  (2006) Diversity of tRNA genes in eukaryotes. Nucleic Acids Res 34(21):6137-46
Hopper AK  (2006) Cellular dynamics of small RNAs. Crit Rev Biochem Mol Biol 41(1):3-19
Marck C, et al.  (2006) The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications. Nucleic Acids Res 34(6):1816-35
Fender A, et al.  (2004) A yeast arginine specific tRNA is a remnant aspartate acceptor. Nucleic Acids Res 32(17):5076-86
Behm-Ansmant I, et al.  (2003) The Saccharomyces cerevisiae U2 snRNA:pseudouridine-synthase Pus7p is a novel multisite-multisubstrate RNA:Psi-synthase also acting on tRNAs. RNA 9(11):1371-82
Giuliodori S, et al.  (2003) A composite upstream sequence motif potentiates tRNA gene transcription in yeast. J Mol Biol 333(1):1-20
Hopper AK and Phizicky EM  (2003) tRNA transfers to the limelight. Genes Dev 17(2):162-80
Walter F, et al.  (2002) Binding of tobramycin leads to conformational changes in yeast tRNA(Asp) and inhibition of aminoacylation. EMBO J 21(4):760-8
Wittberger D, et al.  (2000) Evaluation of uranyl photocleavage as a probe to monitor ion binding and flexibility in RNAs. J Mol Biol 300(2):339-52
Auffinger P and Westhof E  (1999) Singly and bifurcated hydrogen-bonded base-pairs in tRNA anticodon hairpins and ribozymes. J Mol Biol 292(3):467-83
Auffinger P, et al.  (1999) Molecular dynamics simulations of solvated yeast tRNA(Asp). Biophys J 76(1 Pt 1):50-64
Hani J and Feldmann H  (1998) tRNA genes and retroelements in the yeast genome. Nucleic Acids Res 26(3):689-96
Jacq C, et al.  (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome IV. Nature 387(6632 Suppl):75-8
Matveeva O, et al.  (1997) A rapid in vitro method for obtaining RNA accessibility patterns for complementary DNA probes: correlation with an intracellular pattern and known RNA structures. Nucleic Acids Res 25(24):5010-6
Percudani R, et al.  (1997) Transfer RNA gene redundancy and translational selection in Saccharomyces cerevisiae. J Mol Biol 268(2):322-30
Frugier M, et al.  (1994) Identity switches between tRNAs aminoacylated by class I glutaminyl- and class II aspartyl-tRNA synthetases. Biochemistry 33(33):9912-21
Results: 1 - 30 of 44 records
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