SNR6/snR6 Literature Guide Help

Other names published for SNR6: U6, U6 snRNA, snR6

SNR6 Literature Curation Summary

Curated References for SNR6: 158

Date of last curation: 2013-05-22

ReferenceOther Genes Addressed
Guo Z, et al.  (2009) Single-molecule analysis of protein-free U2-U6 snRNAs. Nat Struct Mol Biol 16(11):1154-9
Khanna M, et al.  (2009) A systematic characterization of Cwc21, the yeast ortholog of the human spliceosomal protein SRm300. RNA 15(12):2174-85
Luhtala N and Parker R  (2009) LSM1 over-expression in Saccharomyces cerevisiae depletes U6 snRNA levels. Nucleic Acids Res 37(16):5529-36
Martin-Tumasz S and Butcher SE  (2009) (1)H, (13)C and (15)N resonance assignments of a ribonucleoprotein complex consisting of Prp24-RRM2 bound to a fragment of U6 RNA. Biomol NMR Assign 3(2):227-30
McGrail JC, et al.  (2009) The RNA binding protein Cwc2 interacts directly with the U6 snRNA to link the nineteen complex to the spliceosome during pre-mRNA splicing. Nucleic Acids Res 37(13):4205-17
Mefford MA and Staley JP  (2009) Evidence that U2/U6 helix I promotes both catalytic steps of pre-mRNA splicing and rearranges in between these steps. RNA 15(7):1386-97
Rosonina E, et al.  (2009) Sub1 Functions in Osmoregulation and in Transcription by both RNA Polymerases II and III. Mol Cell Biol 29(8):2308-21
Tavenet A, et al.  (2009) Genome-wide location analysis reveals a role for Sub1 in RNA polymerase III transcription. Proc Natl Acad Sci U S A 106(34):14265-70
Valenzuela L, et al.  (2009) Transcription independent insulation at TFIIIC-dependent insulators. Genetics 183(1):131-48
Venditti V, et al.  (2009) Minimum-energy path for a u6 RNA conformational change involving protonation, base-pair rearrangement and base flipping. J Mol Biol 391(5):894-905
Vinayachandran V, et al.  (2009) Multiple sequence-directed possibilities provide a pool of nucleosome position choices in different states of activity of a gene. Epigenetics Chromatin 2(1):4
Wahl MC, et al.  (2009) The spliceosome: design principles of a dynamic RNP machine. Cell 136(4):701-18
Zhang L, et al.  (2009) Structural evidence for consecutive Hel308-like modules in the spliceosomal ATPase Brr2. Nat Struct Mol Biol 16(7):731-9
van Werven FJ, et al.  (2009) Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome. Nat Struct Mol Biol 16(10):1043-8
Arimbasseri AG and Bhargava P  (2008) Chromatin structure and expression of a gene transcribed by RNA polymerase III are independent of H2A.Z deposition. Mol Cell Biol 28(8):2598-607
Bellare P, et al.  (2008) A role for ubiquitin in the spliceosome assembly pathway. Nat Struct Mol Biol 15(5):444-51
Copela LA, et al.  (2008) Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation. RNA 14(6):1214-27
D'Ambrosio C, et al.  (2008) Identification of cis-acting sites for condensin loading onto budding yeast chromosomes. Genes Dev 22(16):2215-27
Dery KJ, et al.  (2008) Assembly and glycerol gradient isolation of yeast spliceosomes containing transcribed or synthetic U6 snRNA. Methods Mol Biol 488:41-63
Hacker I, et al.  (2008) Localization of Prp8, Brr2, Snu114 and U4/U6 proteins in the yeast tri-snRNP by electron microscopy. Nat Struct Mol Biol 15(11):1206-12
Karaduman R, et al.  (2008) Structure of yeast U6 snRNPs: Arrangement of Prp24p and the LSm complex as revealed by electron microscopy. RNA 14(12):2528-2537
Sapra AK, et al.  (2008) The splicing factor Prp17 interacts with the U2, U5 and U6 snRNPs and associates with the spliceosome pre- and post-catalysis. Biochem J 416(3):365-74
Soragni E and Kassavetis GA  (2008) Absolute Gene Occupancies by RNA Polymerase III, TFIIIB, and TFIIIC in Saccharomyces cerevisiae. J Biol Chem 283(39):26568-76
Stevens SW  (2008) Purification of ribonucleoproteins using peptide-elutable antibodies and other affinity techniques. Methods Mol Biol 488:65-84
Bae E, et al.  (2007) Structure and interactions of the first three RNA recognition motifs of splicing factor prp24. J Mol Biol 367(5):1447-58
Braglia P, et al.  (2007) Requirement of Nhp6 Proteins for Transcription of a Subset of tRNA Genes and Heterochromatin Barrier Function in Saccharomyces cerevisiae. Mol Cell Biol 27(5):1545-57
Ciesla M, et al.  (2007) Maf1 Is Involved in Coupling Carbon Metabolism to RNA Polymerase III Transcription. Mol Cell Biol 27(21):7693-702
Liu L, et al.  (2007) Opposing classes of prp8 alleles modulate the transition between the catalytic steps of pre-mRNA splicing. Nat Struct Mol Biol 14(6):519-26
McManus CJ, et al.  (2007) A dynamic bulge in the U6 RNA internal stem loop functions in spliceosome assembly and activation. RNA 13(12):2252-2265
Mitrovich QM and Guthrie C  (2007) Evolution of small nuclear RNAs in S. cerevisiae, C. albicans, and other hemiascomycetous yeasts. RNA 13(12):2066-2080