NAM7/YMR080C Literature Guide Help

Other names published for NAM7: IFS2, MOF4, UPF1, SUP113, ATP-dependent RNA helicase NAM7, YMR080C

NAM7 Literature Curation Summary

Curated References for NAM7: 215

Date of last curation: 2013-05-07

ReferenceOther Genes Addressed
Shi C, et al.  (2011) Arabidopsis Plants Having Defects in Nonsense-mediated mRNA Decay Factors UPF1, UPF2, and UPF3 Show Photoperiod-dependent Phenotypes in Development and Stress Responses.LID - 10.1111/j.1744-7909.2011.01093.x [doi] J Integr Plant Biol ()
Swisher KD and Parker R  (2011) Interactions between Upf1 and the decapping factors Edc3 and Pat1 in Saccharomyces cerevisiae. PLoS One 6(10):e26547
Toesca I, et al.  (2011) Cryptic transcription mediates repression of subtelomeric metal homeostasis genes. PLoS Genet 7(6):e1002163
Ai HW, et al.  (2010) Genetically encoded alkenes in yeast. Angew Chem Int Ed Engl 49(5):935-7
Chalamcharla VR, et al.  (2010) Nuclear expression of a group II intron is consistent with spliceosomal intron ancestry. Genes Dev 24(8):827-36
Dong S, et al.  (2010) Degradation of YRA1 Pre-mRNA in the cytoplasm requires translational repression, multiple modular intronic elements, Edc3p, and Mex67p. PLoS Biol 8(4):e1000360
Dutko JA, et al.  (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66
Feuerhahn S, et al.  (2010) TERRA biogenesis, turnover and implications for function. FEBS Lett 584(17):3812-8
Ghosh S, et al.  (2010) Translational competence of ribosomes released from a premature termination codon is modulated by NMD factors. RNA 16(9):1832-47
Hu W, et al.  (2010) Nonsense-mediated mRNA decapping occurs on polyribosomes in Saccharomyces cerevisiae. Nat Struct Mol Biol 17(2):244-7
Johansson MJ and Jacobson A  (2010) Nonsense-mediated mRNA decay maintains translational fidelity by limiting magnesium uptake. Genes Dev 24(14):1491-5
Mekouar M, et al.  (2010) Detection and analysis of alternative splicing in Yarrowia lipolytica reveal structural constraints facilitating nonsense-mediated decay of intron-retaining transcripts. Genome Biol 11(6):R65
Nicholson P and Muhlemann O  (2010) Cutting the nonsense: the degradation of PTC-containing mRNAs. Biochem Soc Trans 38(6):1615-20
On T, et al.  (2010) The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses. Proteins 78(9):2075-89
Shabel'skaia SV and Zhuravleva GA  (2010) [Mutations of Sup35 gene cause defects of NMD] Mol Biol (Mosk) 44(1):51-9
Umate P, et al.  (2010) Genome-wide analysis of helicase gene family from rice and Arabidopsis: a comparison with yeast and human. Plant Mol Biol 73(4-5):449-65
Atkins JF and Bjork GR  (2009) A gripping tale of ribosomal frameshifting: extragenic suppressors of frameshift mutations spotlight P-site realignment. Microbiol Mol Biol Rev 73(1):178-210
Cole SE, et al.  (2009) A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay. Mol Cell 34(4):440-50
Crotti LB and Horowitz DS  (2009) Exon sequences at the splice junctions affect splicing fidelity and alternative splicing. Proc Natl Acad Sci U S A 106(45):18954-9
Estrella LA, et al.  (2009) The shuttling protein Npl3 promotes translation termination accuracy in Saccharomyces cerevisiae. J Mol Biol 394(3):410-22
Fujii K, et al.  (2009) A role for ubiquitin in the clearance of nonfunctional rRNAs. Genes Dev 23(8):963-74
Ghazal G, et al.  (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109
Ho CK, et al.  (2009) Identification of nucleases and phosphatases by direct biochemical screen of the Saccharomyces cerevisiae proteome. PLoS One 4(9):e6993
Hu W, et al.  (2009) Co-translational mRNA decay in Saccharomyces cerevisiae. Nature 461(7261):225-9
Kawashima T, et al.  (2009) Nonsense-mediated mRNA decay mutes the splicing defects of spliceosome component mutations. RNA 15(12):2236-47
Kebaara BW and Atkin AL  (2009) Long 3'-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in Saccharomyces cerevisiae. Nucleic Acids Res 37(9):2771-8
Kolitz SE, et al.  (2009) Kinetic and thermodynamic analysis of the role of start codon/anticodon base pairing during eukaryotic translation initiation. RNA 15(1):138-52
Kuroha K, et al.  (2009) Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome. EMBO Rep 10(11):1265-71
Stalder L and Muhlemann O  (2009) Processing bodies are not required for mammalian nonsense-mediated mRNA decay. RNA 15(7):1265-73
[No authors listed]  (2009) [Search of genes influencing propagation of the prion-like antisuppressor determinant [ISP+] in yeast using insertion library] Mol Biol (Mosk) 43(3):392-9