UBI4/YLL039C Literature Guide Help

Other names published for UBI4: SCD2, UB14, ubiquitin, YLL039C

UBI4 Literature Curation Summary

Curated References for UBI4: 239

Date of last curation: 2013-05-15

ReferenceOther Genes Addressed
Au WC, et al.  (2013) A Novel Role of the N-Terminus of Budding Yeast Histone H3 Variant Cse4 in Ubiquitin-Mediated Proteolysis. Genetics ()
Chahwan R, et al.  (2013) Dma/RNF8 proteins are evolutionarily conserved E3 ubiquitin ligases that target septins. Cell Cycle 12(6):1000-8
Dixon EK, et al.  (2013) Nonenzymatic assembly of branched polyubiquitin chains for structural and biochemical studies. Bioorg Med Chem ()
Dornfeld K  (2013) Antifolate Response in Replication Arrest Mutants of Saccharomyces cerevisiae. Anticancer Res 33(5):2037-41
Roscoe BP, et al.  (2013) Analyses of the effects of all ubiquitin point mutants on yeast growth rate. J Mol Biol 425(8):1363-77
Schreiber A and Peter M  (2013) Substrate recognition in selective autophagy and the ubiquitin-proteasome system. Biochim Biophys Acta ()
Shiber A, et al.  (2013) Ubiquitin conjugation triggers misfolded protein sequestration into quality-control foci when Hsp70 chaperone levels are limiting. Mol Biol Cell ()
Alonso A, et al.  (2012) The yeast homologue of the microtubule-associated protein Lis1 interacts with the sumoylation machinery and a SUMO-targeted ubiquitin ligase. Mol Biol Cell 23(23):4552-66
Ang K, et al.  (2012) Mediator acts upstream of the transcriptional activator gal4. PLoS Biol 10(3):e1001290
Ayer A, et al.  (2012) A genome-wide screen in yeast identifies specific oxidative stress genes required for the maintenance of sub-cellular redox homeostasis. PLoS One 7(9):e44278
Braten O, et al.  (2012) Generation of free ubiquitin chains is up-regulated in stress and facilitated by the HECT domain ubiquitin ligases UFD4 and HUL5. Biochem J 444(3):611-7
Enserink JM and Kolodner RD  (2012) What makes the engine hum: Rad6, a cell cycle supercharger. Cell Cycle 11(2):249-52
Finley D, et al.  (2012) The Ubiquitin-Proteasome System of Saccharomyces cerevisiae. Genetics 192(2):319-60
Jarmoszewicz K, et al.  (2012) Rsp5 Ubiquitin Ligase Is Required for Protein Trafficking in Saccharomyces cerevisiae COPI Mutants. PLoS One 7(6):e39582
Oeljeklaus S, et al.  (2012) Identification of core components and transient interactors of the peroxisomal importomer by dual-track stable isotope labeling with amino acids in cell culture analysis. J Proteome Res 11(4):2567-80
Patil A, et al.  (2012) Translational infidelity-induced protein stress results from a deficiency in Trm9-catalyzed tRNA modifications. RNA Biol 9(7):990-1001
Sims JJ, et al.  (2012) Polyubiquitin-sensor proteins reveal localization and linkage-type dependence of cellular ubiquitin signaling.LID - 10.1038/nmeth.1888 [doi] Nat Methods ()
Singh RK, et al.  (2012) Recognition and cleavage of related to ubiquitin 1 (Rub1) and Rub1-ubiquitin chains by components of the ubiquitin-proteasome system. Mol Cell Proteomics 11(12):1595-611
Sohn CH, et al.  (2012) Designer reagents for mass spectrometry-based proteomics: clickable cross-linkers for elucidation of protein structures and interactions. Anal Chem 84(6):2662-9
Tkach JM, et al.  (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76
Varshavsky A  (2012) Three decades of studies to understand the functions of the ubiquitin family. Methods Mol Biol 832():1-11
Vizoso-Vazquez A, et al.  (2012) Ixr1p and the control of the Saccharomyces cerevisiae hypoxic response. Appl Microbiol Biotechnol 94(1):173-84
van Wijk SJ, et al.  (2012) Role of UbL family modifiers and their binding proteins in cell signaling. Methods Mol Biol 832():163-71
Ai Y, et al.  (2011) A novel ubiquitin binding mode in the S. cerevisiae translesion synthesis DNA polymerase ?. Mol Biosyst 7(6):1874-82
Becerra M, et al.  (2011) Comparative transcriptome analysis of yeast strains carrying slt2, rlm1, and pop2 deletions. Genome 54(2):99-109
Berndsen CE and Wolberger C  (2011) A spectrophotometric assay for conjugation of ubiquitin and ubiquitin-like proteins. Anal Biochem 418(1):102-10
Berry DB, et al.  (2011) Multiple means to the same end: the genetic basis of acquired stress resistance in yeast. PLoS Genet 7(11):e1002353
Boender LG, et al.  (2011) Cellular responses of Saccharomyces cerevisiae at near-zero growth rates: transcriptome analysis of anaerobic retentostat cultures. FEMS Yeast Res 11(8):603-20
Dennissen FJ, et al.  (2011) Mutant ubiquitin (UBB+1) associated with neurodegenerative disorders is hydrolyzed by ubiquitin C-terminal hydrolase L3 (UCH-L3). FEBS Lett 585(16):2568-74
Fries T, et al.  (2011) The Saccharomyces cerevisiae ubiquitin E3 ligase Asr1p targets calmodulin for ubiquitylation. Biochem Biophys Res Commun 411(1):197-201