PUF4/YGL014W Literature Guide Help

Other names published for PUF4: YGL023, YGL014W

PUF4 Literature Curation Summary

Curated References for PUF4: 45

Date of last curation: 2013-04-25

ReferenceOther Genes Addressed
Blewett NH and Goldstrohm AC  (2012) A eukaryotic translation initiation factor 4E-binding protein promotes mRNA decapping and is required for PUF repression. Mol Cell Biol 32(20):4181-94
Campbell ZT, et al.  (2012) Cooperativity in RNA-protein interactions: global analysis of RNA binding specificity. Cell Rep 1(5):570-81
Fox TD  (2012) Mitochondrial protein synthesis, import, and assembly. Genetics 192(4):1203-34
Qiu C, et al.  (2012) Divergence of Pumilio/fem-3 mRNA binding factor (PUF) protein specificity through variations in an RNA-binding pocket. J Biol Chem 287(9):6949-57
Valley CT, et al.  (2012) Patterns and plasticity in RNA-protein interactions enable recruitment of multiple proteins through a single site. Proc Natl Acad Sci U S A 109(16):6054-9
Vazquez-Pianzola P and Suter B  (2012) Conservation of the RNA Transport Machineries and Their Coupling to Translation Control across Eukaryotes. Comp Funct Genomics 2012():287852
Castells-Roca L, et al.  (2011) Heat shock response in yeast involves changes in both transcription rates and mRNA stabilities. PLoS One 6(2):e17272
Mittal N, et al.  (2011) Interplay between posttranscriptional and posttranslational interactions of RNA-binding proteins. J Mol Biol 409(3):466-79
Quenault T, et al.  (2011) PUF proteins: repression, activation and mRNA localization. Trends Cell Biol 21(2):104-12
Riordan DP, et al.  (2011) Identification of RNA recognition elements in the Saccharomyces cerevisiae transcriptome. Nucleic Acids Res 39(4):1501-9
Yosefzon Y, et al.  (2011) Divergent RNA binding specificity of yeast Puf2p. RNA 17(8):1479-88
Chritton JJ and Wickens M  (2010) Translational repression by PUF proteins in vitro. RNA 16(6):1217-25
Cridge AG, et al.  (2010) Identifying eIF4E-binding protein translationally-controlled transcripts reveals links to mRNAs bound by specific PUF proteins. Nucleic Acids Res 38(22):8039-50
Louw C, et al.  (2010) Regulation of endo-polygalacturonase activity in Saccharomyces cerevisiae. FEMS Yeast Res 10(1):44-57
On T, et al.  (2010) The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses. Proteins 78(9):2075-89
Alberti S, et al.  (2009) A systematic survey identifies prions and illuminates sequence features of prionogenic proteins. Cell 137(1):146-58
Richards KD, et al.  (2009) A database of microsatellite genotypes for Saccharomyces cerevisiae. Antonie Van Leeuwenhoek 96(3):355-9
Zhu D, et al.  (2009) A 5' cytosine binding pocket in Puf3p specifies regulation of mitochondrial mRNAs. Proc Natl Acad Sci U S A 106(48):20192-7
Goldstrohm AC, et al.  (2008) Regulated deadenylation in vitro. Methods Enzymol 448:77-106
Hogan DJ, et al.  (2008) Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system. PLoS Biol 6(10):e255
Miller MT, et al.  (2008) Basis of altered RNA-binding specificity by PUF proteins revealed by crystal structures of yeast Puf4p. Nat Struct Mol Biol 15(4):397-402
Palumbo MC, et al.  (2008) Collective behavior in gene regulation: Post-transcriptional regulation and the temporal compartmentalization of cellular cycles. FEBS J 275(10):2364-71
Ulbricht RJ and Olivas WM  (2008) Puf1p acts in combination with other yeast Puf proteins to control mRNA stability. RNA 14(2):246-62
Elemento O, et al.  (2007) A Universal Framework for Regulatory Element Discovery across All Genomes and Data Types. Mol Cell 28(2):337-50
Hook BA, et al.  (2007) Two yeast PUF proteins negatively regulate a single mRNA. J Biol Chem 282(21):15430-8
Keene JD  (2007) RNA regulons: coordination of post-transcriptional events. Nat Rev Genet 8(7):533-43
Matsushima Y, et al.  (2007) Studies on Fungal Pumilio Gene Family through Mining Multiple Genome-Scale Data Sets. Kobe J Med Sci 53(4):163-9
Goldstrohm AC, et al.  (2006) PUF proteins bind Pop2p to regulate messenger RNAs. Nat Struct Mol Biol 13(6):533-9
Ohkuni K, et al.  (2006) Suppressor analysis of the mpt5/htr1/uth4/puf5 deletion in Saccharomyces cerevisiae. Mol Genet Genomics 275(1):81-8
Sopko R, et al.  (2006) Mapping pathways and phenotypes by systematic gene overexpression. Mol Cell 21(3):319-30