RPL40B/YKR094C Literature Guide Help

Other names published for RPL40B: UBI2, CEP52B, UB12, L40B, L40e, ubiquitin-ribosomal 60S subunit protein L40B fusion protein, YKR094C

RPL40B Literature Curation Summary

Curated References for RPL40B: 90

Date of last curation: 2013-05-21

ReferenceOther Genes Addressed
Reinders J, et al.  (2006) Toward the complete yeast mitochondrial proteome: multidimensional separation techniques for mitochondrial proteomics. J Proteome Res 5(7):1543-54
Swanson KA, et al.  (2006) Structural Basis for Monoubiquitin Recognition by the Ede1 UBA Domain. J Mol Biol 358(3):713-24
Byrne KP and Wolfe KH  (2005) The Yeast Gene Order Browser: combining curated homology and syntenic context reveals gene fate in polyploid species. Genome Res 15(10):1456-61
Denison C, et al.  (2005) Proteomic insights into ubiquitin and ubiquitin-like proteins. Curr Opin Chem Biol 9(1):69-75
Peng J and Cheng D  (2005) Proteomic analysis of ubiquitin conjugates in yeast. Methods Enzymol 399:367-81
Shang F, et al.  (2005) Lys6-modified ubiquitin inhibits ubiquitin-dependent protein degradation. J Biol Chem 280(21):20365-74
Wang BD, et al.  (2005) Condensin binding at distinct and specific chromosomal sites in the Saccharomyces cerevisiae genome. Mol Cell Biol 25(16):7216-25
Beyer A, et al.  (2004) Post-transcriptional expression regulation in the yeast Saccharomyces cerevisiae on a genomic scale. Mol Cell Proteomics 3(11):1083-92
Nakao A, et al.  (2004) RPG: the Ribosomal Protein Gene database. Nucleic Acids Res 32(Database issue):D168-70
O'Rourke SM and Herskowitz I  (2004) Unique and redundant roles for HOG MAPK pathway components as revealed by whole-genome expression analysis. Mol Biol Cell 15(2):532-42
Tong AH, et al.  (2004) Global mapping of the yeast genetic interaction network. Science 303(5659):808-13
Varadan R, et al.  (2004) Solution conformation of Lys63-linked di-ubiquitin chain provides clues to functional diversity of polyubiquitin signaling. J Biol Chem 279(8):7055-63
Welsch CA, et al.  (2004) Genetic, biochemical, and transcriptional responses of Saccharomyces cerevisiae to the novel immunomodulator FTY720 largely mimic those of the natural sphingolipid phytosphingosine. J Biol Chem 279(35):36720-31
Jones DL, et al.  (2003) Transcriptome profiling of a Saccharomyces cerevisiae mutant with a constitutively activated Ras/cAMP pathway. Physiol Genomics 16(1):107-18
Sickmann A, et al.  (2003) The proteome of Saccharomyces cerevisiae mitochondria. Proc Natl Acad Sci U S A 100(23):13207-12
Lecompte O, et al.  (2002) Comparative analysis of ribosomal proteins in complete genomes: an example of reductive evolution at the domain scale. Nucleic Acids Res 30(24):5382-90
Lee SW, et al.  (2002) Direct mass spectrometric analysis of intact proteins of the yeast large ribosomal subunit using capillary LC/FTICR. Proc Natl Acad Sci U S A 99(9):5942-7
Bertolaet BL, et al.  (2001) UBA domains of DNA damage-inducible proteins interact with ubiquitin. Nat Struct Biol 8(5):417-22
Lafontaine DL and Tollervey D  (2001) The function and synthesis of ribosomes. Nat Rev Mol Cell Biol 2(7):514-20
Shieh HL, et al.  (2001) Biochemical analysis of fructose-1,6-bisphosphatase import into vacuole import and degradation vesicles reveals a role for UBC1 in vesicle biogenesis. J Biol Chem 276(13):10398-406
Xie Y and Varshavsky A  (2001) RPN4 is a ligand, substrate, and transcriptional regulator of the 26S proteasome: a negative feedback circuit. Proc Natl Acad Sci U S A 98(6):3056-61
Hamilton KS, et al.  (2000) Identification of the ubiquitin interfacial residues in a ubiquitin-E2 covalent complex. J Biomol NMR 18(4):319-27
Hochstrasser M  (2000) Evolution and function of ubiquitin-like protein-conjugation systems. Nat Cell Biol 2(8):E153-7
Ling R, et al.  (2000) Histidine-tagged ubiquitin substitutes for wild-type ubiquitin in Saccharomyces cerevisiae and facilitates isolation and identification of in vivo substrates of the ubiquitin pathway. Anal Biochem 282(1):54-64
Lucero P, et al.  (2000) Monoubiquitination is sufficient to signal internalization of the maltose transporter in Saccharomyces cerevisiae. J Bacteriol 182(1):241-3
Spence J, et al.  (2000) Cell cycle-regulated modification of the ribosome by a variant multiubiquitin chain. Cell 102(1):67-76
Kano R, et al.  (1999) Repeated ubiquitin genes in Trichophyton mentagrophytes. Curr Microbiol 39(5):302-5
Lascaris RF, et al.  (1999) DNA-binding requirements of the yeast protein Rap1p as selected in silico from ribosomal protein gene promoter sequences. Bioinformatics 15(4):267-77
Ouspenski II, et al.  (1999) New yeast genes important for chromosome integrity and segregation identified by dosage effects on genome stability. Nucleic Acids Res 27(15):3001-8
Swaminathan S, et al.  (1999) The Doa4 deubiquitinating enzyme is required for ubiquitin homeostasis in yeast. Mol Biol Cell 10(8):2583-94