DBR1/YKL149C Literature Guide Help

Other names published for DBR1: PRP26, YKL149C

DBR1 Literature Curation Summary

Curated References for DBR1: 51

Date of last curation: 2013-01-28

ReferenceOther Genes Addressed
Armakola M, et al.  (2012) Inhibition of RNA lariat debranching enzyme suppresses TDP-43 toxicity in ALS disease models. Nat Genet 44(12):1302-9
Aulds J, et al.  (2012) Global identification of new substrates for the yeast endoribonuclease, RNase mitochondrial RNA processing (MRP). J Biol Chem 287(44):37089-97
Harigaya Y and Parker R  (2012) Global analysis of mRNA decay intermediates in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 109(29):11764-9
Risler JK, et al.  (2012) Host co-factors of the retrovirus-like transposon Ty1. Mob DNA 3(1):12
Cheng Z and Menees TM  (2011) RNA splicing and debranching viewed through analysis of RNA lariats. Mol Genet Genomics 286(5-6):395-410
Meyer M, et al.  (2011) Deciphering 3'ss Selection in the Yeast Genome Reveals an RNA Thermosensor that Mediates Alternative Splicing. Mol Cell 43(6):1033-9
Mayas RM, et al.  (2010) Spliceosome discards intermediates via the DEAH box ATPase Prp43p. Proc Natl Acad Sci U S A 107(22):10020-5
Chen AK, et al.  (2009) Response of Saccharomyces cerevisiae to stress-free acidification. J Microbiol 47(1):1-8
Coughlin DJ, et al.  (2008) Genome-wide search for yeast RNase P substrates reveals role in maturation of intron-encoded box C/D small nucleolar RNAs. Proc Natl Acad Sci U S A 105(34):12218-23
Malagon F and Jensen TH  (2008) The T body, a new cytoplasmic RNA granule in Saccharomyces cerevisiae. Mol Cell Biol 28(19):6022-32
Wilson MA, et al.  (2008) Diverse aberrancies target yeast mRNAs to cytoplasmic mRNA surveillance pathways. Biochim Biophys Acta 1779(9):550-7
Juneau K, et al.  (2007) High-density yeast-tiling array reveals previously undiscovered introns and extensive regulation of meiotic splicing. Proc Natl Acad Sci U S A 104(5):1522-7
Liu L, et al.  (2007) Opposing classes of prp8 alleles modulate the transition between the catalytic steps of pre-mRNA splicing. Nat Struct Mol Biol 14(6):519-26
Maxwell PH and Curcio MJ  (2007) Host factors that control long terminal repeat retrotransposons in Saccharomyces cerevisiae: implications for regulation of mammalian retroviruses. Eukaryot Cell 6(7):1069-80
Pratico ED and Silverman SK  (2007) Ty1 reverse transcriptase does not read through the proposed 2',5'-branched retrotransposition intermediate in vitro. RNA 13(9):1528-36
Zhang Z, et al.  (2007) Genome-wide identification of spliced introns using a tiling microarray. Genome Res 17(4):503-9
Cai H, et al.  (2006) Genomewide Screen Reveals a Wide Regulatory Network for Di/Tripeptide Utilization in Saccharomyces cerevisiae. Genetics 172(3):1459-76
Konarska MM, et al.  (2006) Repositioning of the reaction intermediate within the catalytic center of the spliceosome. Mol Cell 21(4):543-53
Mourani R and Damha MJ  (2006) Synthesis, characterization, and biological properties of small branched RNA fragments containing chiral (Rp and Sp) 2',5'-phosphorothioate linkages. Nucleosides Nucleotides Nucleic Acids 25(2):203-29
Burckin T, et al.  (2005) Exploring functional relationships between components of the gene expression machinery. Nat Struct Mol Biol 12(2):175-82
Coombes CE and Boeke JD  (2005) An evaluation of detection methods for large lariat RNAs. RNA 11(3):323-31
Khalid MF, et al.  (2005) Structure-function analysis of yeast RNA debranching enzyme (Dbr1), a manganese-dependent phosphodiesterase. Nucleic Acids Res 33(19):6349-60
Tu BP, et al.  (2005) Logic of the yeast metabolic cycle: temporal compartmentalization of cellular processes. Science 310(5751):1152-8
Cheng Z and Menees TM  (2004) RNA branching and debranching in the yeast retrovirus-like element Ty1. Science 303(5655):240-3
Faber AW, et al.  (2004) The RNA catabolic enzymes Rex4p, Rnt1p, and Dbr1p show genetic interaction with trans-acting factors involved in processing of ITS1 in Saccharomyces cerevisiae pre-rRNA. RNA 10(12):1946-56
Carriero S, et al.  (2003) Branchpoint sugar stereochemistry determines the hydrolytic susceptibility of branched RNA fragments by the yeast debranching enzyme (YDBR). Nucleosides Nucleotides Nucleic Acids 22(5-8):1599-602
Griffith JL, et al.  (2003) Functional genomics reveals relationships between the retrovirus-like Ty1 element and its host Saccharomyces cerevisiae. Genetics 164(3):867-79
He F, et al.  (2003) Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast. Mol Cell 12(6):1439-52
Kushner DB, et al.  (2003) Systematic, genome-wide identification of host genes affecting replication of a positive-strand RNA virus. Proc Natl Acad Sci U S A 100(26):15764-9
Salem LA, et al.  (2003) Relationship between RNA lariat debranching and Ty1 element retrotransposition. J Virol 77(23):12795-806