ABF1/YKL112W Literature Guide Help

Other names published for ABF1: BAF1, OBF1, REB2, SBF1, YKL112W

ABF1 Literature Curation Summary

Curated References for ABF1: 329

Date of last curation: 2013-05-14

ReferenceOther Genes Addressed
Boiteux S and Jinks-Robertson S  (2013) DNA Repair Mechanisms and the Bypass of DNA Damage in Saccharomyces cerevisiae. Genetics 193(4):1025-64
van Bakel H, et al.  (2013) A compendium of nucleosome and transcript profiles reveals determinants of chromatin architecture and transcription. PLoS Genet 9(5):e1003479
Cremona CA, et al.  (2012) Extensive DNA damage-induced sumoylation contributes to replication and repair and acts in addition to the mec1 checkpoint. Mol Cell 45(3):422-32
Hansen L, et al.  (2012) Differences in local genomic context of bound and unbound motifs. Gene 506(1):125-34
Henry SA, et al.  (2012) Metabolism and Regulation of Glycerolipids in the Yeast Saccharomyces cerevisiae. Genetics 190(2):317-49
Rando OJ and Winston F  (2012) Chromatin and transcription in yeast. Genetics 190(2):351-87
Ribaud V, et al.  (2012) DNA-end capping by the budding yeast transcription factor and subtelomeric binding protein Tbf1. EMBO J 31(1):138-49
Sharon E, et al.  (2012) Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.LID - 10.1038/nbt.2205 [doi] Nat Biotechnol ()
Smith DJ and Whitehouse I  (2012) Intrinsic coupling of lagging-strand synthesis to chromatin assembly.LID - 10.1038/nature10895 [doi] Nature ()
Taddei A and Gasser SM  (2012) Structure and function in the budding yeast nucleus. Genetics 192(1):107-29
Vohradsky J  (2012) Stochastic simulation for the inference of transcriptional control network of yeast cyclins genes. Nucleic Acids Res 40(15):7096-103
Waters R, et al.  (2012) Nucleotide excision repair in cellular chromatin: studies with yeast from nucleotide to gene to genome. Int J Mol Sci 13(9):11141-64
Wellinger RJ and Zakian VA  (2012) Everything You Ever Wanted to Know About Saccharomyces cerevisiae Telomeres: Beginning to End. Genetics 191(4):1073-105
Westman JO, et al.  (2012) Proteomic Analysis of the Increased Stress Tolerance of Saccharomyces cerevisiae Encapsulated in Liquid Core Alginate-Chitosan Capsules. PLoS One 7(11):e49335
Zhang X, et al.  (2012) Functions of Protosilencers in the Formation and Maintenance of Heterochromatin in Saccharomyces cerevisiae. PLoS One 7(5):e37092
Bosio MC, et al.  (2011) Promoter architectures in the yeast ribosomal expression program. Transcription 2(2):71-77
Eser U, et al.  (2011) Commitment to a Cellular Transition Precedes Genome-wide Transcriptional Change. Mol Cell 43(4):515-27
Ganapathi M, et al.  (2011) Extensive role of the general regulatory factors, Abf1 and Rap1, in determining genome-wide chromatin structure in budding yeast. Nucleic Acids Res 39(6):2032-44
Gancarz BL, et al.  (2011) Systematic identification of novel, essential host genes affecting bromovirus RNA replication. PLoS One 6(8):e23988
Gordan R, et al.  (2011) Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol 12(12):R125
Henikoff JG, et al.  (2011) Epigenome characterization at single base-pair resolution. Proc Natl Acad Sci U S A 108(45):18318-23
Hickman MA, et al.  (2011) Reinventing heterochromatin in budding yeasts: Sir2 and the origin recognition complex take center stage. Eukaryot Cell 10(9):1183-92
Higa CH, et al.  (2011) Constraint-based analysis of gene interactions using restricted boolean networks and time-series data. BMC Proc 5 Suppl 2():S5
Jansen A and Verstrepen KJ  (2011) Nucleosome Positioning in Saccharomyces cerevisiae. Microbiol Mol Biol Rev 75(2):301-20
Moazed D  (2011) Mechanisms for the inheritance of chromatin States. Cell 146(4):510-8
Ostapenko D and Solomon MJ  (2011) Anaphase promoting complex-dependent degradation of transcriptional repressors Nrm1 and Yhp1 in Saccharomyces cerevisiae. Mol Biol Cell 22(13):2175-84
Pan J, et al.  (2011) A Hierarchical Combination of Factors Shapes the Genome-wide Topography of Yeast Meiotic Recombination Initiation. Cell 144(5):719-31
Perales R, et al.  (2011) Histone occupancy in vivo at the 601 nucleosome binding element is determined by transcriptional history. Mol Cell Biol 31(16):3485-96
Sun JQ, et al.  (2011) Boundaries of transcriptionally silent chromatin in Saccharomyces cerevisiae. Genes Genet Syst 86(2):73-81
Swamy KB, et al.  (2011) Evidence of association between Nucleosome Occupancy and the Evolution of Transcription Factor Binding Sites in Yeast. BMC Evol Biol 11(1):150