TOA2/YKL058W Literature Guide Help

Other names published for TOA2: YKL058W

TOA2 Literature Curation Summary

Curated References for TOA2: 87

Date of last curation: 2013-05-21

ReferenceOther Genes Addressed
Light WH, et al.  (2013) A conserved role for human nup98 in altering chromatin structure and promoting epigenetic transcriptional memory. PLoS Biol 11(3):e1001524
Estruch F, et al.  (2012) Insights into mRNP biogenesis provided by new genetic interactions among export and transcription factors. BMC Genet 13():80
Napoli C, et al.  (2012) Unraveling framework of the ancestral Mediator complex in human diseases. Biochimie 94(3):579-87
Rhee HS and Pugh BF  (2012) Genome-wide structure and organization of eukaryotic pre-initiation complexes. Nature 483(7389):295-301
Tkach JM, et al.  (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
Carter R and Drouin G  (2009) The evolutionary rates of eukaryotic RNA polymerases and of their transcription factors are affected by the level of concerted evolution of the genes they transcribe. Mol Biol Evol 26(11):2515-20
Sikorski TW and Buratowski S  (2009) The basal initiation machinery: beyond the general transcription factors. Curr Opin Cell Biol 21(3):344-51
Zhou Z, et al.  (2009) Maneuver at the transcription start site: Mot1p and NC2 navigate TFIID/TBP to specific core promoter elements. Epigenetics 4(1):1-4
Kwapisz M, et al.  (2008) Early evolution of eukaryotic DNA-dependent RNA polymerases. Trends Genet 24(5):211-5
Sevilimedu A, et al.  (2008) TFIIB aptamers inhibit transcription by perturbing PIC formation at distinct stages. Nucleic Acids Res 36(9):3118-27
Biswas D, et al.  (2007) Chd1 and yFACT Act in Opposition in Regulating Transcription. Mol Cell Biol 27(18):6279-87
Hoiby T, et al.  (2007) A facelift for the general transcription factor TFIIA. Biochim Biophys Acta 1769(7-8):429-36
Lim MK, et al.  (2007) Gal11p dosage-compensates transcriptional activator deletions via Taf14p. J Mol Biol 374(1):9-23
Biswas D, et al.  (2006) Opposing roles for Set2 and yFACT in regulating TBP binding at promoters. EMBO J 25(19):4479-89
Kraemer SM, et al.  (2006) TFIIA plays a role in the response to oxidative stress. Eukaryot Cell 5(7):1081-90
Yu H and Gerstein M  (2006) Genomic analysis of the hierarchical structure of regulatory networks. Proc Natl Acad Sci U S A 103(40):14724-31
Zanton SJ and Pugh BF  (2006) Full and partial genome-wide assembly and disassembly of the yeast transcription machinery in response to heat shock. Genes Dev 20(16):2250-65
Biswas D, et al.  (2005) The yeast FACT complex has a role in transcriptional initiation. Mol Cell Biol 25(14):5812-22
Robinson MM, et al.  (2005) Mapping and functional characterization of the TAF11 interaction with TFIIA. Mol Cell Biol 25(3):945-57
Biswas D, et al.  (2004) Role for Nhp6, Gcn5, and the Swi/Snf complex in stimulating formation of the TATA-binding protein-TFIIA-DNA complex. Mol Cell Biol 24(18):8312-21
Geisberg JV and Struhl K  (2004) Cellular stress alters the transcriptional properties of promoter-bound Mot1-TBP complexes. Mol Cell 14(4):479-89
Geisberg JV and Struhl K  (2004) Quantitative sequential chromatin immunoprecipitation, a method for analyzing co-occupancy of proteins at genomic regions in vivo. Nucleic Acids Res 32(19):e151
Warfield L, et al.  (2004) Positive and negative functions of the SAGA complex mediated through interaction of Spt8 with TBP and the N-terminal domain of TFIIA. Genes Dev 18(9):1022-34
Bleichenbacher M, et al.  (2003) Novel interactions between the components of human and yeast TFIIA/TBP/DNA complexes. J Mol Biol 332(4):783-93
Upadhyaya AB and DeJong J  (2003) Expression of human TFIIA subunits in Saccharomyces cerevisiae identifies regions with conserved and species-specific functions. Biochim Biophys Acta 1625(1):88-97
Yu Y, et al.  (2003) Regulation of TATA-binding protein binding by the SAGA complex and the Nhp6 high-mobility group protein. Mol Cell Biol 23(6):1910-21
Lombardia LJ, et al.  (2002) Genome-wide analysis of yeast transcription upon calcium shortage. Cell Calcium 32(2):83-91
Woychik NA and Hampsey M  (2002) The RNA polymerase II machinery: structure illuminates function. Cell 108(4):453-63
Kraemer SM, et al.  (2001) TFIIA interacts with TFIID via association with TATA-binding protein and TAF40. Mol Cell Biol 21(5):1737-46