PAP2/YOL115W Literature Guide Help

Other names published for PAP2: TRF4, non-canonical poly(A) polymerase PAP2, YOL115W

PAP2 - Mutants/Phenotypes (61)

ReferenceOther Genes Addressed
Dickinson H, et al.  (2012) The TRAMP complex shows tRNA editing activity in S. cerevisiae. Mol Biol Evol 29(5):1451-9
Durand-Dubief M, et al.  (2012) SWI/SNF-Like Chromatin Remodeling Factor Fun30 Supports Point Centromere Function in S. cerevisiae. PLoS Genet 8(9):e1002974
Figaro S, et al.  (2012) Trm112 is required for Bud23-mediated methylation of the 18S rRNA at position G1575. Mol Cell Biol 32(12):2254-67
Geisler S, et al.  (2012) Decapping of long noncoding RNAs regulates inducible genes. Mol Cell 45(3):279-91
Holub P, et al.  (2012) Air2p is critical for the assembly and RNA-binding of the TRAMP complex and the KOW domain of Mtr4p is crucial for exosome activation. Nucleic Acids Res 40(12):5679-93
Jia H, et al.  (2012) RNA unwinding by the Trf4/Air2/Mtr4 polyadenylation (TRAMP) complex. Proc Natl Acad Sci U S A 109(19):7292-7
Lanza AM, et al.  (2012) Linking yeast Gcn5p catalytic function and gene regulation using a quantitative, graded dominant mutant approach. PLoS One 7(4):e36193
Loya TJ, et al.  (2012) A genetic screen for terminator function in yeast identifies a role for a new functional domain in termination factor Nab3. Nucleic Acids Res 40(15):7476-91
Schmid M, et al.  (2012) Rrp6p controls mRNA poly(A) tail length and its decoration with poly(A) binding proteins. Mol Cell 47(2):267-80
Yibmantasiri P, et al.  (2012) Molecular basis for fungicidal action of neothyonidioside, a triterpene glycoside from the sea cucumber, Australostichopus mollis. Mol Biosyst 8(3):902-12
Clemente-Blanco A, et al.  (2011) Cdc14 phosphatase promotes segregation of telomeres through repression of RNA polymerase II transcription.LID - 10.1038/ncb2365 [doi] Nat Cell Biol ()
Fasken MB, et al.  (2011) Air1 zinc knuckles 4 and 5 and a conserved IWRXY motif are critical for the function and integrity of the Trf4/5-Air1/2-Mtr4 polyadenylation (TRAMP) RNA quality control complex. J Biol Chem 286(43):37429-45
Kloimwieder A and Winston F  (2011) A Screen for Germination Mutants in Saccharomyces cerevisiae. G3 (Bethesda) 1(2):143-9
Marquardt S, et al.  (2011) Distinct RNA degradation pathways and 3' extensions of yeast non-coding RNA species. Transcription 2(3):145-154
Neil H and Jacquier A  (2011) Enrichment of unstable non-coding RNAs and their genome-wide identification. Methods Mol Biol 759():87-106
Wahba L, et al.  (2011) RNase H and Multiple RNA Biogenesis Factors Cooperate to Prevent RNA:DNA Hybrids from Generating Genome Instability. Mol Cell 44(6):978-88
Wlotzka W, et al.  (2011) The nuclear RNA polymerase II surveillance system targets polymerase III transcripts. EMBO J 30(9):1790-803
van Dijk EL, et al.  (2011) XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.LID - 10.1038/nature10118 [doi] Nature ()
Thomson E and Tollervey D  (2010) The final step in 5.8S rRNA processing is cytoplasmic in Saccharomyces cerevisiae. Mol Cell Biol 30(4):976-84
Yadon AN, et al.  (2010) Chromatin Remodeling around Nucleosome-Free Regions Leads to Repression of Noncoding RNA Transcription. Mol Cell Biol 30(21):5110-22
Holbein S, et al.  (2009) Cordycepin interferes with 3' end formation in yeast independently of its potential to terminate RNA chain elongation. RNA 15(5):837-49
O'Sullivan JM, et al.  (2009) Repeated elements coordinate the spatial organization of the yeast genome. Yeast 26(2):125-38
Pinskaya M, et al.  (2009) H3 lysine 4 di- and tri-methylation deposited by cryptic transcription attenuates promoter activation. EMBO J 28(12):1697-707
Roth KM, et al.  (2009) Regulation of NAB2 mRNA 3'-end formation requires the core exosome and the Trf4p component of the TRAMP complex. RNA 15(6):1045-58
San Paolo S, et al.  (2009) Distinct roles of non-canonical poly(A) polymerases in RNA metabolism. PLoS Genet 5(7):e1000555
Berretta J, et al.  (2008) A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae. Genes Dev 22(5):615-26
Chernyakov I, et al.  (2008) Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1. Genes Dev 22(10):1369-80
Ciais D, et al.  (2008) The mRNA encoding the yeast ARE-binding protein Cth2 is generated by a novel 3' processing pathway. Nucleic Acids Res 36(9):3075-84
Copela LA, et al.  (2008) Competition between the Rex1 exonuclease and the La protein affects both Trf4p-mediated RNA quality control and pre-tRNA maturation. RNA 14(6):1214-27
Gellon L, et al.  (2008) Intrinsic 5'-deoxyribose-5-phosphate lyase activity in Saccharomyces cerevisiae Trf4 protein with a possible role in base excision DNA repair. DNA Repair (Amst) 7(2):187-98