SET2/YJL168C Literature Guide Help

Other names published for SET2: EZL1, KMT3, YJL168C

SET2 - Mutants/Phenotypes (81)

ReferenceOther Genes Addressed
Kim T and Buratowski S  (2009) Dimethylation of H3K4 by Set1 recruits the Set3 histone deacetylase complex to 5' transcribed regions. Cell 137(2):259-72
Knott SR, et al.  (2009) Genome-wide replication profiles indicate an expansive role for Rpd3L in regulating replication initiation timing or efficiency, and reveal genomic loci of Rpd3 function in Saccharomyces cerevisiae. Genes Dev 23(9):1077-90
Lickwar CR, et al.  (2009) The Set2/Rpd3S pathway suppresses cryptic transcription without regard to gene length or transcription frequency. PLoS ONE 4(3):e4886
Pinskaya M, et al.  (2009) H3 lysine 4 di- and tri-methylation deposited by cryptic transcription attenuates promoter activation. EMBO J 28(12):1697-707
Plazas-Mayorca MD, et al.  (2009) One-pot shotgun quantitative mass spectrometry characterization of histones. J Proteome Res 8(11):5367-74
Pryde F, et al.  (2009) H3 k36 methylation helps determine the timing of cdc45 association with replication origins. PLoS One 4(6):e5882
Verzijlbergen KF, et al.  (2009) Multiple histone modifications in euchromatin promote heterochromatin formation by redundant mechanisms in Saccharomyces cerevisiae. BMC Mol Biol 10:76
Ansel J, et al.  (2008) Cell-to-cell stochastic variation in gene expression is a complex genetic trait. PLoS Genet 4(4):e1000049
Biswas D, et al.  (2008) A Role for Chd1 and Set2 in Negatively Regulating DNA Replication in Saccharomyces cerevisiae. Genetics 178(2):649-59
Biswas D, et al.  (2008) Different genetic functions for the Rpd3(L) and Rpd3(S) complexes suggest competition between NuA4 and Rpd3(S). Mol Cell Biol 28(14):4445-58
Cheung V, et al.  (2008) Chromatin- and Transcription-Related Factors Repress Transcription from within Coding Regions throughout the Saccharomyces cerevisiae Genome. PLoS Biol 6(11):e277
Dai J, et al.  (2008) Probing nucleosome function: a highly versatile library of synthetic histone H3 and H4 mutants. Cell 134(6):1066-78
Du HN, et al.  (2008) Histone H3 K36 methylation is mediated by a trans-histone methylation pathway involving an interaction between Set2 and histone H4. Genes Dev 22(20):2786-98
Merker JD, et al.  (2008) The histone methylase Set2p and the histone deacetylase Rpd3p repress meiotic recombination at the HIS4 meiotic recombination hotspot in Saccharomyces cerevisiae. DNA Repair (Amst) 7(8):1298-308
Youdell ML, et al.  (2008) Roles for Ctk1 and Spt6 in regulating the different methylation states of histone H3 lysine 36. Mol Cell Biol 28(16):4915-26
Biswas D, et al.  (2007) Chd1 and yFACT Act in Opposition in Regulating Transcription. Mol Cell Biol 27(18):6279-87
Chu Y, et al.  (2007) Regulation of histone modification and cryptic transcription by the Bur1 and Paf1 complexes. EMBO J 26(22):4646-56
Govind CK, et al.  (2007) Gcn5 promotes acetylation, eviction, and methylation of nucleosomes in transcribed coding regions. Mol Cell 25(1):31-42
Jin Y, et al.  (2007) Simultaneous Mutation of Methylated Lysine Residues in Histone H3 Causes Enhanced Gene Silencing, Cell Cycle Defects, and Cell Lethality in Saccharomyces cerevisiae. Mol Cell Biol 27(19):6832-41
Kundu S, et al.  (2007) SWI/SNF is required for transcriptional memory at the yeast GAL gene cluster. Genes Dev 21(8):997-1004
Li B, et al.  (2007) Infrequently transcribed long genes depend on the Set2/Rpd3S pathway for accurate transcription. Genes Dev 21(11):1422-30
Mutiu AI, et al.  (2007) The role of histone ubiquitylation and deubiquitylation in gene expression as determined by the analysis of an HTB1(K123R) Saccharomyces cerevisiae strain. Mol Genet Genomics 277(5):491-506
Tompa R and Madhani HD  (2007) Histone H3 lysine 36 methylation antagonizes silencing in Saccharomyces cerevisiae independently of the Rpd3S histone deacetylase complex. Genetics 175(2):585-93
Vermeulen M, et al.  (2007) Selective anchoring of TFIID to nucleosomes by trimethylation of histone H3 lysine 4. Cell 131(1):58-69
Biswas D, et al.  (2006) Opposing roles for Set2 and yFACT in regulating TBP binding at promoters. EMBO J 25(19):4479-89
Chu Y, et al.  (2006) The BUR1 cyclin-dependent protein kinase is required for the normal pattern of histone methylation by SET2. Mol Cell Biol 26(8):3029-38
Game JC, et al.  (2006) The RAD6/BRE1 histone modification pathway in Saccharomyces confers radiation resistance through a RAD51-dependent process that is independent of RAD18. Genetics 173(4):1951-68
Hogan GJ, et al.  (2006) Cell cycle-specified fluctuation of nucleosome occupancy at gene promoters. PLoS Genet 2(9):e158
Martin DG, et al.  (2006) Methylation of histone H3 mediates the association of the NuA3 histone acetyltransferase with chromatin. Mol Cell Biol 26(8):3018-28
Seol JH, et al.  (2006) Different roles of histone H3 lysine 4 methylation in chromatin maintenance. Biochem Biophys Res Commun 349(2):463-70