SIR4/YDR227W Literature Guide Help

Other names published for SIR4: ASD1, STE9, UTH2, YDR227W

SIR4 - Genomic expression study (18)

ReferenceOther Genes Addressed
Leung A, et al.  (2011) Histone H2B ubiquitylation and H3 lysine 4 methylation prevent ectopic silencing of euchromatic loci important for the cellular response to heat. Mol Biol Cell 22(15):2741-53
Ouyang X, et al.  (2011) Yap1 activation by H(2)O(2) or thiol-reactive chemicals elicits distinct adaptive gene responses. Free Radic Biol Med 50(1):1-13
Kyriss MN, et al.  (2010) Novel Functional Residues in the Core Domain of Histone H2B Regulate Yeast Gene Expression and Silencing and Affect the Response to DNA Damage. Mol Cell Biol 30(14):3503-18
Li M, et al.  (2010) Thiamine Biosynthesis in Saccharomyces cerevisiae Is Regulated by the NAD+-Dependent Histone Deacetylase Hst1. Mol Cell Biol 30(13):3329-41
Wan Y, et al.  (2010) Histone chaperone Chz1p regulates H2B ubiquitination and subtelomeric anti-silencing. Nucleic Acids Res 38(5):1431-40
Jin Y, et al.  (2009) Genetic and Genomewide Analysis of Simultaneous Mutations in Acetylated and Methylated Lysine Residues in Histone H3 in Saccharomyces cerevisiae. Genetics 181(2):461-72
Taddei A, et al.  (2009) The functional importance of telomere clustering: Global changes in gene expression result from SIR factor dispersion. Genome Res 19(4):611-25
Choi JK, et al.  (2008) Stochastic and regulatory role of chromatin silencing in genomic response to environmental changes. PLoS ONE 3(8):e3002
Greenall A, et al.  (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146
Jin Y, et al.  (2007) Simultaneous Mutation of Methylated Lysine Residues in Histone H3 Causes Enhanced Gene Silencing, Cell Cycle Defects, and Cell Lethality in Saccharomyces cerevisiae. Mol Cell Biol 27(19):6832-41
Tompa R and Madhani HD  (2007) Histone H3 lysine 36 methylation antagonizes silencing in Saccharomyces cerevisiae independently of the Rpd3S histone deacetylase complex. Genetics 175(2):585-93
Venkatasubrahmanyam S, et al.  (2007) Genome-wide, as opposed to local, antisilencing is mediated redundantly by the euchromatic factors Set1 and H2A.Z. Proc Natl Acad Sci U S A 104(42):16609-14
Gardner RG, et al.  (2005) Degradation-mediated protein quality control in the nucleus. Cell 120(6):803-15
Gardner RG, et al.  (2005) Ubp10/Dot4p regulates the persistence of ubiquitinated histone H2B: distinct roles in telomeric silencing and general chromatin. Mol Cell Biol 25(14):6123-39
Mercier G, et al.  (2005) A haploid-specific transcriptional response to irradiation in Saccharomyces cerevisiae. Nucleic Acids Res 33(20):6635-43
Dasgupta A, et al.  (2004) Sir Antagonist 1 (San1) is a ubiquitin ligase. J Biol Chem 279(26):26830-8
Orlandi I, et al.  (2004) Transcriptional profiling of ubp10 null mutant reveals altered subtelomeric gene expression and insurgence of oxidative stress response. J Biol Chem 279(8):6414-25
Wyrick JJ, et al.  (1999) Chromosomal landscape of nucleosome-dependent gene expression and silencing in yeast. Nature 402(6760):418-21