SIR2/YDL042C Literature Guide Help

Other names published for SIR2: MAR1, YDL042C

SIR2 - Genomic expression study (33)

ReferenceOther Genes Addressed
Weiner A, et al.  (2012) Systematic dissection of roles for chromatin regulators in a yeast stress response. PLoS Biol 10(7):e1001369
Batenchuk C, et al.  (2011) Chromosomal position effects are linked to sir2-mediated variation in transcriptional burst size. Biophys J 100(10):L56-8
Boender LG, et al.  (2011) Cellular responses of Saccharomyces cerevisiae at near-zero growth rates: transcriptome analysis of anaerobic retentostat cultures. FEMS Yeast Res 11(8):603-20
Guo Z, et al.  (2011) SIR2 and other genes are abundantly expressed in long-lived natural segregants for replicative aging of the budding yeast Saccharomyces cerevisiae. FEMS Yeast Res 11(4):345-55
Leung A, et al.  (2011) Histone H2B ubiquitylation and H3 lysine 4 methylation prevent ectopic silencing of euchromatic loci important for the cellular response to heat. Mol Biol Cell 22(15):2741-53
Rahat O, et al.  (2011) Multiple pathways regulating the calorie restriction response in yeast. J Gerontol A Biol Sci Med Sci 66(2):163-9
Ratnakumar S, et al.  (2011) Phenomic and transcriptomic analyses reveal that autophagy plays a major role in desiccation tolerance in Saccharomyces cerevisiae. Mol Biosyst 7(1):139-49
Toesca I, et al.  (2011) Cryptic transcription mediates repression of subtelomeric metal homeostasis genes. PLoS Genet 7(6):e1002163
Breitkreutz A, et al.  (2010) A global protein kinase and phosphatase interaction network in yeast. Science 328(5981):1043-6
Li M, et al.  (2010) Thiamine Biosynthesis in Saccharomyces cerevisiae Is Regulated by the NAD+-Dependent Histone Deacetylase Hst1. Mol Cell Biol 30(13):3329-41
Rodriguez-Colman MJ, et al.  (2010) The forkhead transcription factor hcm1 promotes mitochondrial biogenesis and stress resistance in yeast. J Biol Chem 285(47):37092-101
Li L, et al.  (2009) Budding yeast SSD1-V regulates transcript levels of many longevity genes and extends chronological life span in purified quiescent cells. Mol Biol Cell 20(17):3851-64
Taddei A, et al.  (2009) The functional importance of telomere clustering: Global changes in gene expression result from SIR factor dispersion. Genome Res 19(4):611-25
Choi JK, et al.  (2008) Stochastic and regulatory role of chromatin silencing in genomic response to environmental changes. PLoS ONE 3(8):e3002
Greenall A, et al.  (2008) A genome wide analysis of the response to uncapped telomeres in budding yeast reveals a novel role for the NAD+ biosynthetic gene BNA2 in chromosome end protection. Genome Biol 9(10):R146
Jin Y, et al.  (2007) Simultaneous Mutation of Methylated Lysine Residues in Histone H3 Causes Enhanced Gene Silencing, Cell Cycle Defects, and Cell Lethality in Saccharomyces cerevisiae. Mol Cell Biol 27(19):6832-41
Tompa R and Madhani HD  (2007) Histone H3 lysine 36 methylation antagonizes silencing in Saccharomyces cerevisiae independently of the Rpd3S histone deacetylase complex. Genetics 175(2):585-93
Venkatasubrahmanyam S, et al.  (2007) Genome-wide, as opposed to local, antisilencing is mediated redundantly by the euchromatic factors Set1 and H2A.Z. Proc Natl Acad Sci U S A 104(42):16609-14
Fabrizio P, et al.  (2005) Sir2 blocks extreme life-span extension. Cell 123(4):655-67
Mercier G, et al.  (2005) A haploid-specific transcriptional response to irradiation in Saccharomyces cerevisiae. Nucleic Acids Res 33(20):6635-43
Dasgupta A, et al.  (2004) Sir Antagonist 1 (San1) is a ubiquitin ligase. J Biol Chem 279(26):26830-8
Humphrey EL, et al.  (2004) Rpd3p relocation mediates a transcriptional response to rapamycin in yeast. Chem Biol 11(3):295-9
Kaeberlein M, et al.  (2004) Saccharomyces cerevisiae SSD1-V confers longevity by a Sir2p-independent mechanism. Genetics 166(4):1661-72
Bedalov A, et al.  (2003) NAD+-dependent deacetylase Hst1p controls biosynthesis and cellular NAD+ levels in Saccharomyces cerevisiae. Mol Cell Biol 23(19):7044-54
Ladurner AG, et al.  (2003) Bromodomains mediate an acetyl-histone encoded antisilencing function at heterochromatin boundaries. Mol Cell 11(2):365-76
McCord R, et al.  (2003) Rfm1, a novel tethering factor required to recruit the Hst1 histone deacetylase for repression of middle sporulation genes. Mol Cell Biol 23(6):2009-16
Meneghini MD, et al.  (2003) Conserved histone variant H2A.Z protects euchromatin from the ectopic spread of silent heterochromatin. Cell 112(5):725-36
Kaeberlein M, et al.  (2002) High osmolarity extends life span in Saccharomyces cerevisiae by a mechanism related to calorie restriction. Mol Cell Biol 22(22):8056-66
Lin SJ, et al.  (2002) Calorie restriction extends Saccharomyces cerevisiae lifespan by increasing respiration. Nature 418(6895):344-8
Bedalov A, et al.  (2001) Identification of a small molecule inhibitor of Sir2p. Proc Natl Acad Sci U S A 98(26):15113-8