RPO21/YDL140C Literature Guide Help

Other names published for RPO21: RPB1, RPB220, SUA8, B220, YDL140C

RPO21 - Genomic co-immunoprecipitation study (36)

ReferenceOther Genes Addressed
Chinchilla K, et al.  (2012) Interactions of Sen1, Nrd1, and Nab3 with multiple phosphorylated forms of the Rpb1 C-terminal domain in Saccharomyces cerevisiae. Eukaryot Cell 11(4):417-29
Chymkowitch P, et al.  (2012) Cdc28 kinase activity regulates the basal transcription machinery at a subset of genes. Proc Natl Acad Sci U S A 109(26):10450-5
Cook KE and O'Shea EK  (2012) Hog1 Controls Global Reallocation of RNA Pol II upon Osmotic Shock in Saccharomyces cerevisiae. G3 (Bethesda) 2(9):1129-36
Garcia-Rubio ML and Aguilera A  (2012) Topological constraints impair RNA polymerase II transcription and causes instability of plasmid-borne convergent genes. Nucleic Acids Res 40(3):1050-64
Mayer A, et al.  (2012) CTD tyrosine phosphorylation impairs termination factor recruitment to RNA polymerase II. Science 336(6089):1723-5
Rhee HS and Pugh BF  (2012) Genome-wide structure and organization of eukaryotic pre-initiation complexes. Nature 483(7389):295-301
Smolle M, et al.  (2012) Chromatin remodelers Isw1 and Chd1 maintain chromatin structure during transcription by preventing histone exchange. Nat Struct Mol Biol 19(9):884-92
Zhang DW, et al.  (2012) Ssu72 phosphatase-dependent erasure of phospho-Ser7 marks on the RNA polymerase II C-terminal domain is essential for viability and transcription termination. J Biol Chem 287(11):8541-51
Garcia-Lopez MC, et al.  (2011) The conserved foot domain of RNA pol II associates with proteins involved in transcriptional initiation and/or early elongation. Genetics 189(4):1235-48
Hyland EM, et al.  (2011) An evolutionarily 'young' lysine residue in histone H3 attenuates transcriptional output in Saccharomyces cerevisiae. Genes Dev 25(12):1306-19
Lahudkar S, et al.  (2011) The mRNA cap-binding complex stimulates the formation of pre-initiation complex at the promoter via its interaction with Mot1p in vivo. Nucleic Acids Res 39(6):2188-209
Poschmann J, et al.  (2011) The Peptidyl Prolyl Isomerase Rrd1 Regulates the Elongation of RNA Polymerase II during Transcriptional Stresses. PLoS One 6(8):e23159
Rosa JL, et al.  (2011) Overlapping Regulation of CenH3 Localization and Histone H3 Turnover by CAF-1 and HIR Proteins in Saccharomyces cerevisiae. Genetics 187(1):9-19
Sperling AS, et al.  (2011) Topoisomerase II binds nucleosome-free DNA and acts redundantly with topoisomerase I to enhance recruitment of RNA Pol II in budding yeast. Proc Natl Acad Sci U S A 108(31):12693-8
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
van Dijk EL, et al.  (2011) XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.LID - 10.1038/nature10118 [doi] Nature ()
Fan X, et al.  (2010) Nucleosome depletion at yeast terminators is not intrinsic and can occur by a transcriptional mechanism linked to 3'-end formation. Proc Natl Acad Sci U S A 107(42):17945-50
Mayer A, et al.  (2010) Uniform transitions of the general RNA polymerase II transcription complex. Nat Struct Mol Biol 17(10):1272-8
Ohtsuki K, et al.  (2010) Genome-wide localization analysis of a complete set of Tafs reveals a specific effect of the taf1 mutation on Taf2 occupancy and provides indirect evidence for different TFIID conformations at different promoters. Nucleic Acids Res 38(6):1805-20
Poorey K, et al.  (2010) RNA synthesis precision is regulated by preinitiation complex turnover. Genome Res 20(12):1679-88
Ghazal G, et al.  (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109
Koerber RT, et al.  (2009) Interaction of transcriptional regulators with specific nucleosomes across the Saccharomyces genome. Mol Cell 35(6):889-902
Lefrancois P, et al.  (2009) Efficient yeast ChIP-Seq using multiplex short-read DNA sequencing. BMC Genomics 10:37
Mosley AL, et al.  (2009) Rtr1 is a CTD phosphatase that regulates RNA polymerase II during the transition from serine 5 to serine 2 phosphorylation. Mol Cell 34(2):168-78
Pelechano V, et al.  (2009) Regulon-specific control of transcription elongation across the yeast genome. PLoS Genet 5(8):e1000614
Selth LA, et al.  (2009) An rtt109-independent role for vps75 in transcription-associated nucleosome dynamics. Mol Cell Biol 29(15):4220-34
Ghavi-Helm Y, et al.  (2008) Genome-wide location analysis reveals a role of TFIIS in RNA polymerase III transcription. Genes Dev 22(14):1934-47
He Q, et al.  (2008) Mediator Requirement Downstream of Chromatin Remodeling during Transcriptional Activation of CHA1 in Yeast. J Biol Chem 283(9):5276-86
Masson P, et al.  (2008) The dual control of TFIIB recruitment by NC2 is gene specific. Nucleic Acids Res 36(2):539-49
Parnell TJ, et al.  (2008) RSC regulates nucleosome positioning at Pol II genes and density at Pol III genes. EMBO J 27(1):100-10