Other names published for XRN1: DST2, RAR5, SEP1, SKI1, KEM1, YGL173C
XRN1 LITERATURE TOPICS
- Curated Literature
- Genetics/Cell Biology
- Cell Cycle Phase Involved
- Cellular Location
- Function/Process
- Genetic Interactions
- Mutants/Phenotypes
- Regulation of
- Regulatory Role
- Nucleic Acid Information
- Gene Product Information
- Related Genes/Proteins
- Research Aids
- Genome-wide Analysis
- Proteome-wide Analysis
- Other Topics
- Additional Information
XRN1 - Genetic Interactions (72)
| Reference | Other Genes Addressed |
|---|---|
| Aulds J, et al. (2012) Global identification of new substrates for the yeast endoribonuclease, RNase mitochondrial RNA processing (MRP). J Biol Chem 287(44):37089-97 | |
| Egecioglu DE, et al. (2012) Quality control of MATa1 splicing and exon skipping by nuclear RNA degradation. Nucleic Acids Res 40(4):1787-96 | |
| Harigaya Y and Parker R (2012) Global analysis of mRNA decay intermediates in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 109(29):11764-9 | |
| Ma Z, et al. (2012) Multiple roles for the Ess1 prolyl isomerase in the RNA polymerase II transcription cycle. Mol Cell Biol 32(17):3594-607 | |
| Sinturel F, et al. (2012) Activation of 5'-3' exoribonuclease Xrn1 by cofactor Dcs1 is essential for mitochondrial function in yeast. Proc Natl Acad Sci U S A 109(21):8264-9 | |
| Tsuboi T, et al. (2012) Dom34:hbs1 plays a general role in quality-control systems by dissociation of a stalled ribosome at the 3' end of aberrant mRNA. Mol Cell 46(4):518-29 | |
| Carroll JS, et al. (2011) The DExD/H box ATPase Dhh1 functions in translational repression, mRNA decay, and processing body dynamics. J Cell Biol 194(4):527-37 | |
| Chang HY, et al. (2011) Genome-wide analysis to identify pathways affecting telomere-initiated senescence in budding yeast. G3 (Bethesda) 1(3):197-208 | |
| Luo G, et al. (2011) Nutrients and the Pkh1/2 and Pkc1 Protein Kinases Control mRNA Decay and P-body Assembly in Yeast. J Biol Chem 286(11):8759-70 | |
| Ramachandran V, et al. (2011) The cAMP-Dependent Protein Kinase Signaling Pathway Is a Key Regulator of P Body Foci Formation. Mol Cell 43(6):973-81 | |
| Schaeffer D and van Hoof A (2011) Different nuclease requirements for exosome-mediated degradation of normal and nonstop mRNAs. Proc Natl Acad Sci U S A 108(6):2366-71 | |
| Vergara SV, et al. (2011) Early Recruitment of AU-Rich Element-Containing mRNAs Determines Their Cytosolic Fate during Iron Deficiency. Mol Cell Biol 31(3):417-29 | |
| Whipple JM, et al. (2011) The yeast rapid tRNA decay pathway primarily monitors the structural integrity of the acceptor and T-stems of mature tRNA. Genes Dev 25(11):1173-84 | |
| van Dijk EL, et al. (2011) XUTs are a class of Xrn1-sensitive antisense regulatory non-coding RNA in yeast.LID - 10.1038/nature10118 [doi] Nature () | |
| Bhattacharya A, et al. (2010) Why Dom34 Stimulates Growth of Cells with Defects of 40S Ribosomal Subunit Biosynthesis. Mol Cell Biol 30(23):5562-71 | |
| Dutko JA, et al. (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66 | |
| Mauchi N, et al. (2010) Stability Control of MTL1 mRNA by the RNA-Binding Protein Khd1p in Yeast. Cell Struct Funct 35(2):95-105 | |
| Talarek N, et al. (2010) Initiation of the TORC1-regulated G0 program requires Igo1/2, which license specific mRNAs to evade degradation via the 5'-3' mRNA decay pathway. Mol Cell 38(3):345-55 | |
| Cole SE, et al. (2009) A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay. Mol Cell 34(4):440-50 | |
| Ghazal G, et al. (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109 | |
| Hong SW, et al. (2009) Phosphorylation of the RNA polymerase II C-terminal domain by TFIIH kinase is not essential for transcription of Saccharomyces cerevisiae genome. Proc Natl Acad Sci U S A 106(34):14276-80 | |
| Lindahl L, et al. (2009) RNase MRP is required for entry of 35S precursor rRNA into the canonical processing pathway. RNA 15(7):1407-16 | |
| Oeffinger M, et al. (2009) Rrp17p is a eukaryotic exonuclease required for 5' end processing of Pre-60S ribosomal RNA. Mol Cell 36(5):768-81 | |
| Passos DO, et al. (2009) Analysis of Dom34 and its function in no-go decay. Mol Biol Cell 20(13):3025-32 | |
| Pinskaya M, et al. (2009) H3 lysine 4 di- and tri-methylation deposited by cryptic transcription attenuates promoter activation. EMBO J 28(12):1697-707 | |
| Schneider C, et al. (2009) The N-terminal PIN domain of the exosome subunit Rrp44 harbors endonuclease activity and tethers Rrp44 to the yeast core exosome. Nucleic Acids Res 37(4):1127-40 | |
| Beckham C, et al. (2008) The DEAD-Box RNA Helicase Ded1p Affects and Accumulates in Saccharomyces cerevisiae P-Bodies. Mol Biol Cell 19(3):984-93 | |
| Chernyakov I, et al. (2008) Degradation of several hypomodified mature tRNA species in Saccharomyces cerevisiae is mediated by Met22 and the 5'-3' exonucleases Rat1 and Xrn1. Genes Dev 22(10):1369-80 | |
| El Hage A, et al. (2008) Efficient termination of transcription by RNA polymerase I requires the 5' exonuclease Rat1 in yeast. Genes Dev 22(8):1069-81 | |
| Gandhi R, et al. (2008) Depurination of Brome Mosaic Virus RNA3 in Vivo Results in Translation-dependent Accelerated Degradation of the Viral RNA. J Biol Chem 283(47):32218-28 |




