SIR2/YDL042C Literature Guide Help

Other names published for SIR2: MAR1, YDL042C

SIR2 - Fungal Related Genes/Proteins (41)

ReferenceOther Genes Addressed
Tung SY, et al.  (2012) Chromatin affinity-precipitation using a small metabolic molecule: its application to analysis of O-acetyl-ADP-ribose. Cell Mol Life Sci 69(4):641-50
Zill OA, et al.  (2012) Evolutionary analysis of heterochromatin protein compatibility by interspecies complementation in Saccharomyces. Genetics 192(3):1001-14
Froyd CA and Rusche LN  (2011) The duplicated deacetylases Sir2 and Hst1 subfunctionalized by acquiring complementary inactivating mutations. Mol Cell Biol 31(16):3351-65
Levasseur A and Pontarotti P  (2011) The role of duplications in the evolution of genomes highlights the need for evolutionary-based approaches in comparative genomics. Biol Direct 6():11
Hickman MA and Rusche LN  (2010) Transcriptional silencing functions of the yeast protein Orc1/Sir3 subfunctionalized after gene duplication. Proc Natl Acad Sci U S A 107(45):19384-9
Zill OA, et al.  (2010) Co-evolution of transcriptional silencing proteins and the DNA elements specifying their assembly. PLoS Biol 8(11):e1000550
Gallagher JE, et al.  (2009) Elaboration, diversification and regulation of the sir1 family of silencing proteins in Saccharomyces. Genetics 181(4):1477-91
Hickman MA and Rusche LN  (2009) The Sir2-Sum1 complex represses transcription using both promoter-specific and long-range mechanisms to regulate cell identity and sexual cycle in the yeast Kluyveromyces lactis. PLoS Genet 5(11):e1000710
Nishida H  (2009) Evolutionary conservation levels of subunits of histone-modifying protein complexes in fungi. Comp Funct Genomics379317
Boivin A, et al.  (2008) Life span extension by dietary restriction is reduced but not abolished by loss of both SIR2 and HST2 in Podospora anserina. Mech Ageing Dev 129(12):714-21
Fu XH, et al.  (2008) Candida albicans, a distinctive fungal model for cellular aging study. Aging Cell 7(5):746-57
Gilson E and Geli V  (2007) How telomeres are replicated. Nat Rev Mol Cell Biol 8(10):825-838
Hickman MA and Rusche LN  (2007) Substitution as a mechanism for genetic robustness: the duplicated deacetylases Hst1p and Sir2p in Saccharomyces cerevisiae. PLoS Genet 3(8):e126
Sanders BD, et al.  (2007) Structural basis for nicotinamide inhibition and base exchange in Sir2 enzymes. Mol Cell 25(3):463-72
Vaquero A, et al.  (2007) NAD+-dependent deacetylation of H4 lysine 16 by class III HDACs. Oncogene 26(37):5505-20
Fabre E, et al.  (2005) Comparative genomics in hemiascomycete yeasts: evolution of sex, silencing, and subtelomeres. Mol Biol Evol 22(4):856-73
Freeman-Cook L, et al.  (2005) Conserved locus-specific silencing functions of Schizosaccharomyces pombe sir2+. Genetics 169(3):1243-60
Yang XJ and Gregoire S  (2005) Class II histone deacetylases: from sequence to function, regulation, and clinical implication. Mol Cell Biol 25(8):2873-84
Borra MT and Denu JM  (2004) Quantitative assays for characterization of the Sir2 family of NAD(+)-dependent deacetylases. Methods Enzymol 376():171-87
Buck SW, et al.  (2004) Diversity in the Sir2 family of protein deacetylases. J Leukoc Biol 75(6):939-50
Shankaranarayana GD, et al.  (2003) Sir2 regulates histone H3 lysine 9 methylation and heterochromatin assembly in fission yeast. Curr Biol 13(14):1240-6
Zhao K, et al.  (2003) Structure and autoregulation of the yeast Hst2 homolog of Sir2. Nat Struct Biol 10(10):864-71
Garcia SN and Pillus L  (2002) A unique class of conditional sir2 mutants displays distinct silencing defects in Saccharomyces cerevisiae. Genetics 162(2):721-36
Grunweller A and Ehrenhofer-Murray AE  (2002) A novel yeast silencer. the 2mu origin of Saccharomyces cerevisiae has HST3-, MIG1- and SIR-dependent silencing activity. Genetics 162(1):59-71
Pandey R, et al.  (2002) Analysis of histone acetyltransferase and histone deacetylase families of Arabidopsis thaliana suggests functional diversification of chromatin modification among multicellular eukaryotes. Nucleic Acids Res 30(23):5036-55
Wagner A  (2002) Asymmetric functional divergence of duplicate genes in yeast. Mol Biol Evol 19(10):1760-8
Rusche LN and Rine J  (2001) Conversion of a gene-specific repressor to a regional silencer. Genes Dev 15(8):955-67
Sutton A, et al.  (2001) A novel form of transcriptional silencing by Sum1-1 requires Hst1 and the origin recognition complex. Mol Cell Biol 21(10):3514-22
Astrom SU, et al.  (2000) Kluyveromyces lactis Sir2p regulates cation sensitivity and maintains a specialized chromatin structure at the cryptic alpha-locus. Genetics 156(1):81-91
Frye RA  (2000) Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins. Biochem Biophys Res Commun 273(2):793-8