Other names published for XRN1: DST2, RAR5, SEP1, SKI1, KEM1, YGL173C
XRN1 LITERATURE TOPICS
- Curated Literature
- Genetics/Cell Biology
- Nucleic Acid Information
- Gene Product Information
- Related Genes/Proteins
- Research Aids
- Genome-wide Analysis
- Proteome-wide Analysis
- Other Topics
- Additional Information
XRN1 - Function/Process (100)
| Reference | Other Genes Addressed |
|---|---|
| Egecioglu DE, et al. (2012) Quality control of MATa1 splicing and exon skipping by nuclear RNA degradation. Nucleic Acids Res 40(4):1787-96 | |
| Geisler S, et al. (2012) Decapping of long noncoding RNAs regulates inducible genes. Mol Cell 45(3):279-91 | |
| Harigaya Y and Parker R (2012) Global analysis of mRNA decay intermediates in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 109(29):11764-9 | |
| Wilusz JE, et al. (2011) tRNAs marked with CCACCA are targeted for degradation. Science 334(6057):817-21 | |
| Checkley MA, et al. (2010) P-body components are required for Ty1 retrotransposition during assembly of retrotransposition-competent virus-like particles. Mol Cell Biol 30(2):382-98 | |
| Dutko JA, et al. (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66 | |
| Fujimura T and Esteban R (2010) Yeast double-stranded RNA virus L-A deliberately synthesizes RNA transcripts with 5'-diphosphate. J Biol Chem 285(30):22911-8 | |
| Cole SE, et al. (2009) A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay. Mol Cell 34(4):440-50 | |
| Jaag HM and Nagy PD (2009) Silencing of Nicotiana benthamiana Xrn4p exoribonuclease promotes tombusvirus RNA accumulation and recombination. Virology 386(2):344-52 | |
| Warkocki Z, et al. (2009) Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components. Nat Struct Mol Biol 16(12):1237-43 | |
| Esteban R, et al. (2008) 20S RNA Narnavirus Defies the Antiviral Activity of SKI1/XRN1 in Saccharomyces cerevisiae. J Biol Chem 283(38):25812-20 | |
| Raisner RM and Madhani HD (2008) Genomewide Screen for Negative Regulators of Sirtuin Activity in Saccharomyces cerevisiae Reveals 40 Loci and Links to Metabolism. Genetics 179(4):1933-44 | |
| Sayani S, et al. (2008) Widespread impact of nonsense-mediated mRNA decay on the yeast intronome. Mol Cell 31(3):360-70 | |
| Teixeira D and Parker R (2007) Analysis of P-body assembly in Saccharomyces cerevisiae. Mol Biol Cell 18(6):2274-87 | |
| Cheng CP, et al. (2006) Suppression of viral RNA recombination by a host exoribonuclease. J Virol 80(6):2631-40 | |
| Gatbonton T, et al. (2006) Telomere length as a quantitative trait: genome-wide survey and genetic mapping of telomere length-control genes in yeast. PLoS Genet 2(3):e35 | |
| Luo W, et al. (2006) The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo model. Genes Dev 20(8):954-65 | |
| Lee A, et al. (2005) Multiple RNA surveillance pathways limit aberrant expression of iron uptake mRNAs and prevent iron toxicity in S. cerevisiae. Mol Cell 19(1):39-51 | |
| Pathak R, et al. (2005) A role for KEM1 at the START of the cell cycle in Saccharomyces cerevisiae. Curr Genet 48(5):300-9 | |
| Serviene E, et al. (2005) Genome-wide screen identifies host genes affecting viral RNA recombination. Proc Natl Acad Sci U S A 102(30):10545-50 | |
| Taylor R, et al. (2005) Gene set coregulated by the Saccharomyces cerevisiae nonsense-mediated mRNA decay pathway. Eukaryot Cell 4(12):2066-77 | |
| Zer C and Chanfreau G (2005) Regulation and surveillance of normal and 3'-extended forms of the yeast aci-reductone dioxygenase mRNA by RNase III cleavage and exonucleolytic degradation. J Biol Chem 280(32):28997-9003 | |
| Gill T, et al. (2004) RNase MRP cleaves the CLB2 mRNA to promote cell cycle progression: novel method of mRNA degradation. Mol Cell Biol 24(3):945-53 | |
| Kshirsagar M and Parker R (2004) Identification of Edc3p as an enhancer of mRNA decapping in Saccharomyces cerevisiae. Genetics 166(2):729-39 | |
| Ross PL, et al. (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 3(12):1154-69 | |
| Yano T, et al. (2004) Deletion of OSH3 gene confers resistance against ISP-1 in Saccharomyces cerevisiae. Biochem Biophys Res Commun 315(1):228-34 | |
| Danin-Kreiselman M, et al. (2003) RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns. Mol Cell 11(5):1279-89 | |
| He F, et al. (2003) Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast. Mol Cell 12(6):1439-52 | |
| Heikkinen HL, et al. (2003) Initiation-mediated mRNA decay in yeast affects heat-shock mRNAs, and works through decapping and 5'-to-3' hydrolysis. Nucleic Acids Res 31(14):4006-16 | |
| Kebaara B, et al. (2003) The Upf-dependent decay of wild-type PPR1 mRNA depends on its 5'-UTR and first 92 ORF nucleotides. Nucleic Acids Res 31(12):3157-65 |





