UPF3/YGR072W Literature Guide Help

Other names published for UPF3: SUA6, SUP112, YGR072W

UPF3 - Function/Process (32)

ReferenceOther Genes Addressed
Dutko JA, et al.  (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66
Ghosh S, et al.  (2010) Translational competence of ribosomes released from a premature termination codon is modulated by NMD factors. RNA 16(9):1832-47
Gatbonton T, et al.  (2006) Telomere length as a quantitative trait: genome-wide survey and genetic mapping of telomere length-control genes in yeast. PLoS Genet 2(3):e35
Taylor R, et al.  (2005) Gene set coregulated by the Saccharomyces cerevisiae nonsense-mediated mRNA decay pathway. Eukaryot Cell 4(12):2066-77
Enomoto S, et al.  (2004) Telomere cap components influence the rate of senescence in telomerase-deficient yeast cells. Mol Cell Biol 24(2):837-45
Harger JW and Dinman JD  (2004) Evidence against a direct role for the Upf proteins in frameshifting or nonsense codon readthrough. RNA 10(11):1721-9
Shirley RL, et al.  (2004) Using the cre-lox recombination system to assess functional impairment caused by amino acid substitutions in yeast proteins. Biol Proced Online 6():209-219
de Pinto B, et al.  (2004) Overexpression of Upf1p compensates for mitochondrial splicing deficiency independently of its role in mRNA surveillance. Mol Microbiol 51(4):1129-42
Dahlseid JN, et al.  (2003) mRNAs encoding telomerase components and regulators are controlled by UPF genes in Saccharomyces cerevisiae. Eukaryot Cell 2(1):134-42
He F, et al.  (2003) Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast. Mol Cell 12(6):1439-52
Kebaara B, et al.  (2003) Genetic background affects relative nonsense mRNA accumulation in wild-type and upf mutant yeast strains. Curr Genet 43(3):171-7
Kebaara B, et al.  (2003) The Upf-dependent decay of wild-type PPR1 mRNA depends on its 5'-UTR and first 92 ORF nucleotides. Nucleic Acids Res 31(12):3157-65
Maderazo AB, et al.  (2003) Nonsense-containing mRNAs that accumulate in the absence of a functional nonsense-mediated mRNA decay pathway are destabilized rapidly upon its restitution. Mol Cell Biol 23(3):842-51
Takahashi S, et al.  (2003) Interaction between Ski7p and Upf1p is required for nonsense-mediated 3'-to-5' mRNA decay in yeast. EMBO J 22(15):3951-9
Messenguy F, et al.  (2002) Role of RNA surveillance proteins Upf1/CpaR, Upf2 and Upf3 in the translational regulation of yeast CPA1 gene. Curr Genet 41(4):224-31
Shirley RL, et al.  (2002) Nuclear import of Upf3p is mediated by importin-alpha/-beta and export to the cytoplasm is required for a functional nonsense-mediated mRNA decay pathway in yeast. Genetics 161(4):1465-82
He F and Jacobson A  (2001) Upf1p, Nmd2p, and Upf3p regulate the decapping and exonucleolytic degradation of both nonsense-containing mRNAs and wild-type mRNAs. Mol Cell Biol 21(5):1515-30
Wang W, et al.  (2001) The role of Upf proteins in modulating the translation read-through of nonsense-containing transcripts. EMBO J 20(4):880-90
Bidou L, et al.  (2000) Nonsense-mediated decay mutants do not affect programmed -1 frameshifting. RNA 6(7):952-61
Maderazo AB, et al.  (2000) Upf1p control of nonsense mRNA translation is regulated by Nmd2p and Upf3p. Mol Cell Biol 20(13):4591-603
He W and Parker R  (1999) Analysis of mRNA decay pathways in Saccharomyces cerevisiae. Methods 17(1):3-10
Lelivelt MJ and Culbertson MR  (1999) Yeast Upf proteins required for RNA surveillance affect global expression of the yeast transcriptome. Mol Cell Biol 19(10):6710-9
Muhlrad D and Parker R  (1999) Aberrant mRNAs with extended 3' UTRs are substrates for rapid degradation by mRNA surveillance. RNA 5(10):1299-307
Dahlseid JN, et al.  (1998) Accumulation of mRNA coding for the ctf13p kinetochore subunit of Saccharomyces cerevisiae depends on the same factors that promote rapid decay of nonsense mRNAs. Genetics 150(3):1019-35
Lew JE, et al.  (1998) Telomere length regulation and telomeric chromatin require the nonsense-mediated mRNA decay pathway. Mol Cell Biol 18(10):6121-30
Ruiz-Echevarria MJ, et al.  (1998) The upf3 protein is a component of the surveillance complex that monitors both translation and mRNA turnover and affects viral propagation. Proc Natl Acad Sci U S A 95(15):8721-6
Atkin AL, et al.  (1997) Relationship between yeast polyribosomes and Upf proteins required for nonsense mRNA decay. J Biol Chem 272(35):22163-72
He F, et al.  (1997) Upf1p, Nmd2p, and Upf3p are interacting components of the yeast nonsense-mediated mRNA decay pathway. Mol Cell Biol 17(3):1580-94
Zhang S, et al.  (1997) Polysome-associated mRNAs are substrates for the nonsense-mediated mRNA decay pathway in Saccharomyces cerevisiae. RNA 3(3):234-44
Leeds P, et al.  (1992) Gene products that promote mRNA turnover in Saccharomyces cerevisiae. Mol Cell Biol 12(5):2165-77