SIR4/YDR227W Literature Guide Help

Other names published for SIR4: ASD1, STE9, UTH2, YDR227W

SIR4 - Function/Process (114)

ReferenceOther Genes Addressed
Fujii M, et al.  (2010) Identification of genes that affect sensitivity to 5-bromodeoxyuridine in the yeast Saccharomyces cerevisiae. Mol Genet Genomics 283(5):461-8
Kozak ML, et al.  (2010) Inactivation of the Sas2 histone acetyltransferase delays senescence driven by telomere dysfunction. EMBO J 29(1):158-70
Weber JM and Ehrenhofer-Murray AE  (2010) Design of a minimal silencer for the silent mating-type locus HML of Saccharomyces cerevisiae. Nucleic Acids Res 38(22):7991-8000
Johnson A, et al.  (2009) Reconstitution of heterochromatin-dependent transcriptional gene silencing. Mol Cell 35(6):769-81
Loney ER, et al.  (2009) Repressive and non-repressive chromatin at native telomeres in Saccharomyces cerevisiae. Epigenetics Chromatin 2(1):18
Martino F, et al.  (2009) Reconstitution of yeast silent chromatin: multiple contact sites and O-AADPR binding load SIR complexes onto nucleosomes in vitro. Mol Cell 33(3):323-34
Marvin ME, et al.  (2009) The association of yKu with subtelomeric core X sequences prevents recombination involving telomeric sequences. Genetics 183(2):453-67, 1SI-13SI
Sinha M, et al.  (2009) Recombinational repair within heterochromatin requires ATP-dependent chromatin remodeling. Cell 138(6):1109-21
Ebrahimi H and Donaldson AD  (2008) Release of yeast telomeres from the nuclear periphery is triggered by replication and maintained by suppression of Ku-mediated anchoring. Genes Dev 22(23):3363-3374
Gao L and Gross DS  (2008) Sir2 silences gene transcription by targeting the transition between RNA polymerase II initiation and elongation. Mol Cell Biol 28(12):3979-94
Marcand S, et al.  (2008) Multiple pathways inhibit NHEJ at telomeres. Genes Dev 22(9):1153-8
Dai J, et al.  (2007) Phosphorylation regulates integration of the yeast Ty5 retrotransposon into heterochromatin. Mol Cell 27(2):289-99
Huang S, et al.  (2007) A novel role for histone chaperones CAF-1 and Rtt106p in heterochromatin silencing. EMBO J 26(9):2274-83
Mead J, et al.  (2007) Swapping the gene-specific and regional silencing specificities of the Hst1 and Sir2 histone deacetylases. Mol Cell Biol 27(7):2466-75
Onishi M, et al.  (2007) Role of the Conserved Sir3-BAH Domain in Nucleosome Binding and Silent Chromatin Assembly. Mol Cell 28(6):1015-28
Connelly JJ, et al.  (2006) Structure and function of the Saccharomyces cerevisiae Sir3 BAH domain. Mol Cell Biol 26(8):3256-65
Gatbonton T, et al.  (2006) Telomere length as a quantitative trait: genome-wide survey and genetic mapping of telomere length-control genes in yeast. PLoS Genet 2(3):e35
Ohkuni K, et al.  (2006) Suppressor analysis of the mpt5/htr1/uth4/puf5 deletion in Saccharomyces cerevisiae. Mol Genet Genomics 275(1):81-8
Therizols P, et al.  (2006) Telomere tethering at the nuclear periphery is essential for efficient DNA double strand break repair in subtelomeric region. J Cell Biol 172(2):189-99
Bystricky K, et al.  (2005) Chromosome looping in yeast: telomere pairing and coordinated movement reflect anchoring efficiency and territorial organization. J Cell Biol 168(3):375-87
Gardner RG, et al.  (2005) Degradation-mediated protein quality control in the nucleus. Cell 120(6):803-15
Klieger Y, et al.  (2005) Involvement of Sir2/4 in silencing of DNA breakage and recombination on mouse YACs during yeast meiosis. Mol Biol Cell 16(3):1449-55
Liou GG, et al.  (2005) Assembly of the SIR complex and its regulation by O-acetyl-ADP-ribose, a product of NAD-dependent histone deacetylation. Cell 121(4):515-27
Mercier G, et al.  (2005) A haploid-specific transcriptional response to irradiation in Saccharomyces cerevisiae. Nucleic Acids Res 33(20):6635-43
Rudner AD, et al.  (2005) A nonhistone protein-protein interaction required for assembly of the SIR complex and silent chromatin. Mol Cell Biol 25(11):4514-28
Taddei A, et al.  (2005) Multiple pathways tether telomeres and silent chromatin at the nuclear periphery: functional implications for sir-mediated repression. Novartis Found Symp 264:140-56; discussion 156-65, 227-30
Bose ME, et al.  (2004) The origin recognition complex and Sir4 protein recruit Sir1p to yeast silent chromatin through independent interactions requiring a common Sir1p domain. Mol Cell Biol 24(2):774-86
Chang CF, et al.  (2004) Calculating the statistical significance of physical clusters of co-regulated genes in the genome: the role of chromatin in domain-wide gene regulation. Nucleic Acids Res 32(5):1798-807
Ferrari S, et al.  (2004) Chromatin domain boundaries delimited by a histone-binding protein in yeast. J Biol Chem 279(53):55520-30
Hsu CL, et al.  (2004) Interaction of Saccharomyces Cdc13p with Pol1p, Imp4p, Sir4p and Zds2p is involved in telomere replication, telomere maintenance and cell growth control. Nucleic Acids Res 32(2):511-21