SIR3/YLR442C Literature Guide Help

Other names published for SIR3: CMT1, MAR2, STE8, YLR442C

SIR3 - Function/Process (146)

ReferenceOther Genes Addressed
Kozak ML, et al.  (2010) Inactivation of the Sas2 histone acetyltransferase delays senescence driven by telomere dysfunction. EMBO J 29(1):158-70
Loney ER, et al.  (2009) Repressive and non-repressive chromatin at native telomeres in Saccharomyces cerevisiae. Epigenetics Chromatin 2(1):18
Marvin ME, et al.  (2009) The association of yKu with subtelomeric core X sequences prevents recombination involving telomeric sequences. Genetics 183(2):453-67, 1SI-13SI
Osborne EA, et al.  (2009) The establishment of gene silencing at single-cell resolution. Nat Genet 41(7):800-6
Ratna P, et al.  (2009) Synergy of repression and silencing gradients along the chromosome. J Mol Biol 387(4):826-39
Sinha M, et al.  (2009) Recombinational repair within heterochromatin requires ATP-dependent chromatin remodeling. Cell 138(6):1109-21
Zhu X and Gustafsson CM  (2009) Distinct differences in chromatin structure at subtelomeric X and Y' elements in budding yeast. PLoS One 4(7):e6363
Buchberger JR, et al.  (2008) Sir3-nucleosome interactions in spreading of silent chromatin in Saccharomyces cerevisiae. Mol Cell Biol 28(22):6903-18
Feeser EA and Wolberger C  (2008) Structural and functional studies of the Rap1 C-terminus reveal novel separation-of-function mutants. J Mol Biol 380(3):520-31
Gao L and Gross DS  (2008) Sir2 silences gene transcription by targeting the transition between RNA polymerase II initiation and elongation. Mol Cell Biol 28(12):3979-94
McBryant SJ, et al.  (2008) The silent information regulator 3 protein, SIR3p, binds to chromatin fibers and assembles a hypercondensed chromatin architecture in the presence of salt. Mol Cell Biol 28(11):3563-72
Norris A, et al.  (2008) Compensatory interactions between Sir3p and the nucleosomal LRS surface imply their direct interaction. PLoS Genet 4(12):e1000301
Altaf M, et al.  (2007) Interplay of chromatin modifiers on a short basic patch of histone H4 tail defines the boundary of telomeric heterochromatin. Mol Cell 28(6):1002-14
Hayashi N, et al.  (2007) Mutations in Ran system affected telomere silencing in Saccharomyces cerevisiae. Biochem Biophys Res Commun 363(3):788-94
Huang S, et al.  (2007) A novel role for histone chaperones CAF-1 and Rtt106p in heterochromatin silencing. EMBO J 26(9):2274-83
Mead J, et al.  (2007) Swapping the gene-specific and regional silencing specificities of the Hst1 and Sir2 histone deacetylases. Mol Cell Biol 27(7):2466-75
Onishi M, et al.  (2007) Role of the Conserved Sir3-BAH Domain in Nucleosome Binding and Silent Chromatin Assembly. Mol Cell 28(6):1015-28
Wilson MA, et al.  (2007) A genomic screen in yeast reveals novel aspects of nonstop mRNA metabolism. Genetics 177(2):773-84
Connelly JJ, et al.  (2006) Structure and function of the Saccharomyces cerevisiae Sir3 BAH domain. Mol Cell Biol 26(8):3256-65
Hou Z, et al.  (2006) Structure of the Sir3 protein bromo adjacent homology (BAH) domain from S. cerevisiae at 1.95 A resolution. Protein Sci 15(5):1182-6
Liaw H and Lustig AJ  (2006) Sir3 C-terminal domain involvement in the initiation and spreading of heterochromatin. Mol Cell Biol 26(20):7616-31
Ohkuni K, et al.  (2006) Suppressor analysis of the mpt5/htr1/uth4/puf5 deletion in Saccharomyces cerevisiae. Mol Genet Genomics 275(1):81-8
Gardner RG, et al.  (2005) Degradation-mediated protein quality control in the nucleus. Cell 120(6):803-15
Katan-Khaykovich Y and Struhl K  (2005) Heterochromatin formation involves changes in histone modifications over multiple cell generations. EMBO J 24(12):2138-49
Klieger Y, et al.  (2005) Involvement of Sir2/4 in silencing of DNA breakage and recombination on mouse YACs during yeast meiosis. Mol Biol Cell 16(3):1449-55
Liou GG, et al.  (2005) Assembly of the SIR complex and its regulation by O-acetyl-ADP-ribose, a product of NAD-dependent histone deacetylation. Cell 121(4):515-27
Mercier G, et al.  (2005) A haploid-specific transcriptional response to irradiation in Saccharomyces cerevisiae. Nucleic Acids Res 33(20):6635-43
Rudner AD, et al.  (2005) A nonhistone protein-protein interaction required for assembly of the SIR complex and silent chromatin. Mol Cell Biol 25(11):4514-28
Bi X, et al.  (2004) Regulation of transcriptional silencing in yeast by growth temperature. J Mol Biol 344(4):893-905
Chang CF, et al.  (2004) Calculating the statistical significance of physical clusters of co-regulated genes in the genome: the role of chromatin in domain-wide gene regulation. Nucleic Acids Res 32(5):1798-807