RPO21/YDL140C Literature Guide Help

Other names published for RPO21: RPB1, RPB220, SUA8, B220, YDL140C

RPO21 - Function/Process (146)

ReferenceOther Genes Addressed
Cai G, et al.  (2012) Interaction of the mediator head module with RNA polymerase II. Structure 20(5):899-910
Kaplan CD, et al.  (2012) Dissection of Pol II Trigger Loop Function and Pol II Activity-Dependent Control of Start Site Selection In Vivo. PLoS Genet 8(4):e1002627
Kellinger MW, et al.  (2012) 5-formylcytosine and 5-carboxylcytosine reduce the rate and substrate specificity of RNA polymerase II transcription. Nat Struct Mol Biol 19(8):831-3
Kellinger MW, et al.  (2012) Dissecting chemical interactions governing RNA polymerase II transcriptional fidelity. J Am Chem Soc 134(19):8231-40
Walmacq C, et al.  (2012) Mechanism of translesion transcription by RNA polymerase II and its role in cellular resistance to DNA damage. Mol Cell 46(1):18-29
Xie P  (2012) A dynamic model for processive transcription elongation and backtracking long pauses by multisubunit RNA polymerases. Proteins 80(8):2020-34
Bintu L, et al.  (2011) The elongation rate of RNA polymerase determines the fate of transcribed nucleosomes.LID - 10.1038/nsmb.2164 [doi] Nat Struct Mol Biol ()
Cheung AC and Cramer P  (2011) Structural basis of RNA polymerase II backtracking, arrest and reactivation. Nature 471(7337):249-53
Alexander RD, et al.  (2010) Splicing-dependent RNA polymerase pausing in yeast. Mol Cell 40(4):582-93
Liu P, et al.  (2010) Genetic organization, length conservation, and evolution of RNA polymerase II carboxyl-terminal domain. Mol Biol Evol 27(11):2628-41
Mayan M and Aragon L  (2010) Cis-interactions between non-coding ribosomal spacers dependent on RNAP-II separate RNAP-I and RNAP-III transcription domains. Cell Cycle 9(21):4328-37
Sigurdsson S, et al.  (2010) Evidence that transcript cleavage is essential for RNA polymerase II transcription and cell viability. Mol Cell 38(2):202-10
Damsma GE and Cramer P  (2009) Molecular basis of transcriptional mutagenesis at 8-oxoguanine. J Biol Chem 284(46):31658-63
Hodges C, et al.  (2009) Nucleosomal fluctuations govern the transcription dynamics of RNA polymerase II. Science 325(5940):626-8
Kireeva M, et al.  (2009) Millisecond phase kinetic analysis of elongation catalyzed by human, yeast, and Escherichia coli RNA polymerase. Methods 48(4):333-45
Wang D, et al.  (2009) Structural basis of transcription: backtracked RNA polymerase II at 3.4 angstrom resolution. Science 324(5931):1203-6
Cheng TF, et al.  (2008) Differential Blocking Effects of the Acetaldehyde-derived DNA Lesion N2-Ethyl-2'-deoxyguanosine on Transcription by Multisubunit and Single Subunit RNA Polymerases. J Biol Chem 283(41):27820-8
Fleming AB, et al.  (2008) H2B ubiquitylation plays a role in nucleosome dynamics during transcription elongation. Mol Cell 31(1):57-66
Gudipati RK, et al.  (2008) Phosphorylation of the RNA polymerase II C-terminal domain dictates transcription termination choice. Nat Struct Mol Biol 15(8):786-94
Kireeva ML, et al.  (2008) Transient reversal of RNA Polymerase II active site closing controls fidelity of transcription elongation. Mol Cell 30(5):557-66
Kwapisz M, et al.  (2008) Mutations of RNA polymerase II activate key genes of the nucleoside triphosphate biosynthetic pathways. EMBO J 27(18):2411-21
Liu P, et al.  (2008) The essential sequence elements required for RNAP II carboxyl-terminal domain function in yeast and their evolutionary conservation. Mol Biol Evol 25(4):719-27
Mohammed S, et al.  (2008) Multiplexed proteomics mapping of yeast RNA polymerase II and III allows near-complete sequence coverage and reveals several novel phosphorylation sites. Anal Chem 80(10):3584-92
Sprouse RO, et al.  (2008) Regulation of TATA-binding protein dynamics in living yeast cells. Proc Natl Acad Sci U S A 105(36):13304-8
Vasiljeva L, et al.  (2008) Transcription Termination and RNA Degradation Contribute to Silencing of RNA Polymerase II Transcription within Heterochromatin. Mol Cell 29(3):313-23
Adkins MW, et al.  (2007) Chromatin disassembly from the PHO5 promoter is essential for the recruitment of the general transcription machinery and coactivators. Mol Cell Biol 27(18):6372-82
Brueckner F, et al.  (2007) CPD damage recognition by transcribing RNA polymerase II. Science 315(5813):859-62
Galburt EA, et al.  (2007) Backtracking determines the force sensitivity of RNAP II in a factor-dependent manner. Nature 446(7137):820-3
Lehmann E, et al.  (2007) Molecular basis of RNA-dependent RNA polymerase II activity. Nature 450(7168):445-9
Singh BN and Hampsey M  (2007) A transcription-independent role for TFIIB in gene looping. Mol Cell 27(5):806-16