ABF1/YKL112W Literature Guide Help

Other names published for ABF1: BAF1, OBF1, REB2, SBF1, YKL112W

ABF1 - Function/Process (51)

Results: 1 - 30 of 51 records
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ReferenceOther Genes Addressed
Ganapathi M, et al.  (2011) Extensive role of the general regulatory factors, Abf1 and Rap1, in determining genome-wide chromatin structure in budding yeast. Nucleic Acids Res 39(6):2032-44
Weber JM and Ehrenhofer-Murray AE  (2010) Design of a minimal silencer for the silent mating-type locus HML of Saccharomyces cerevisiae. Nucleic Acids Res 38(22):7991-8000
Hartley PD and Madhani HD  (2009) Mechanisms that specify promoter nucleosome location and identity. Cell 137(3):445-58
Yu S, et al.  (2009) ABF1-binding Sites Promote Efficient Global Genome Nucleotide Excision Repair. J Biol Chem 284(2):966-73
Schlecht U, et al.  (2008) Genome-wide Expression Profiling, In Vivo DNA Binding Analysis, and Probabilistic Motif Prediction Reveal Novel Abf1 Target Genes during Fermentation, Respiration, and Sporulation in Yeast. Mol Biol Cell 19(5):2193-2207
Yang Q, et al.  (2008) Rapid chip-based capillary electrophoretic mobility shift assay with negative pressure injection for the binding study of transcription factor Abf1 in Saccharomyces cerevisiae. Electrophoresis 29(24):5003-9
Holloway DT, et al.  (2007) Machine learning for regulatory analysis and transcription factor target prediction in yeast. Syst Synth Biol 1(1):25-46
Aranda C, et al.  (2006) Gcn5p contributes to the bidirectional character of the UGA3-GLT1 yeast promoter. Biochem Biophys Res Commun 348(3):989-96
Guo X, et al.  (2006) Histone acetylation and transcriptional regulation in the genome of Saccharomyces cerevisiae. Bioinformatics 22(4):392-9
Kawasaki Y, et al.  (2006) Reconstitution of Saccharomyces cerevisiae prereplicative complex assembly in vitro. Genes Cells 11(7):745-56
Zou Y, et al.  (2006) Asymmetric positioning of nucleosomes and directional establishment of transcriptionally silent chromatin by Saccharomyces cerevisiae silencers. Mol Cell Biol 26(20):7806-19
Petti AA and Church GM  (2005) A network of transcriptionally coordinated functional modules in Saccharomyces cerevisiae. Genome Res 15(9):1298-306
Miyake T, et al.  (2004) Genome-wide analysis of ARS (autonomously replicating sequence) binding factor 1 (Abf1p)-mediated transcriptional regulation in Saccharomyces cerevisiae. J Biol Chem 279(33):34865-72
Yarragudi A, et al.  (2004) Comparison of ABF1 and RAP1 in chromatin opening and transactivator potentiation in the budding yeast Saccharomyces cerevisiae. Mol Cell Biol 24(20):9152-64
Yu S, et al.  (2004) The yeast Rad7/Rad16/Abf1 complex generates superhelical torsion in DNA that is required for nucleotide excision repair. DNA Repair (Amst) 3(3):277-87
Chanet R and Heude M  (2003) Characterization of mutations that are synthetic lethal with pol3-13, a mutated allele of DNA polymerase delta in Saccharomyces cerevisiae. Curr Genet 43(5):337-50
Hieronymus H and Silver PA  (2003) Genome-wide analysis of RNA-protein interactions illustrates specificity of the mRNA export machinery. Nat Genet 33(2):155-61
Keene JD  (2003) Organizing mRNA export. Nat Genet 33(2):111-2
Shimizu M, et al.  (2003) Yeast Ume6p repressor permits activator binding but restricts TBP binding at the HOP1 promoter. Nucleic Acids Res 31(12):3033-7
Fourel G, et al.  (2002) General regulatory factors (GRFs) as genome partitioners. J Biol Chem 277(44):41736-43
Miyake T, et al.  (2002) Identification of a multifunctional domain in autonomously replicating sequence-binding factor 1 required for transcriptional activation, DNA replication, and gene silencing. Mol Cell Biol 22(2):505-16
Valerius O, et al.  (2002) Multiple factors prevent transcriptional interference at the yeast ARO4-HIS7 locus. J Biol Chem 277(24):21440-5
Bodmer-Glavas M, et al.  (2001) RNA polymerase II and III transcription factors can stimulate DNA replication by modifying origin chromatin structures. Nucleic Acids Res 29(22):4570-80
Lebrun E, et al.  (2001) Protosilencers in Saccharomyces cerevisiae subtelomeric regions. Genetics 158(1):167-76
Wenz P, et al.  (2001) A downstream regulatory element located within the coding sequence mediates autoregulated expression of the yeast fatty acid synthase gene FAS2 by the FAS1 gene product. Nucleic Acids Res 29(22):4625-32
Feng L, et al.  (2000) Identification and characterization of Saccharomyces cerevisiae Cdc6 DNA-binding properties. Mol Biol Cell 11(5):1673-85
Lascaris RF, et al.  (2000) Different roles for abf1p and a T-rich promoter element in nucleosome organization of the yeast RPS28A gene. Nucleic Acids Res 28(6):1390-6
Muller M, et al.  (2000) Replication of yeast rDNA initiates downstream of transcriptionally active genes. Mol Cell 5(5):767-77
Suter B, et al.  (2000) DNA repair in a yeast origin of replication: contributions of photolyase and nucleotide excision repair. Nucleic Acids Res 28(10):2060-8
Park HD, et al.  (1999) Synergistic operation of the CAR2 (Ornithine transaminase) promoter elements in Saccharomyces cerevisiae. J Bacteriol 181(22):7052-64
Results: 1 - 30 of 51 records
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