NAM7/YMR080C Literature Guide Help

Other names published for NAM7: IFS2, MOF4, UPF1, SUP113, ATP-dependent RNA helicase NAM7, YMR080C

NAM7 - Function/Process (63)

ReferenceOther Genes Addressed
Dutko JA, et al.  (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66
Ghosh S, et al.  (2010) Translational competence of ribosomes released from a premature termination codon is modulated by NMD factors. RNA 16(9):1832-47
Cole SE, et al.  (2009) A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay. Mol Cell 34(4):440-50
Ho CK, et al.  (2009) Identification of nucleases and phosphatases by direct biochemical screen of the Saccharomyces cerevisiae proteome. PLoS One 4(9):e6993
Kuroha K, et al.  (2009) Upf1 stimulates degradation of the product derived from aberrant messenger RNA containing a specific nonsense mutation by the proteasome. EMBO Rep 10(11):1265-71
Meaux S, et al.  (2008) Nonsense-Mediated mRNA Decay in Yeast Does Not Require PAB1 or a Poly(A) Tail. Mol Cell 29(1):134-40
Sayani S, et al.  (2008) Widespread impact of nonsense-mediated mRNA decay on the yeast intronome. Mol Cell 31(3):360-70
Takahashi S, et al.  (2008) Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast. RNA 14(9):1950-8
Johansson MJ, et al.  (2007) Association of yeast Upf1p with direct substrates of the NMD pathway. Proc Natl Acad Sci U S A 104(52):20872-7
Gatbonton T, et al.  (2006) Telomere length as a quantitative trait: genome-wide survey and genetic mapping of telomere length-control genes in yeast. PLoS Genet 2(3):e35
Sheth U and Parker R  (2006) Targeting of aberrant mRNAs to cytoplasmic processing bodies. Cell 125(6):1095-109
Titz B, et al.  (2006) Transcriptional activators in yeast. Nucleic Acids Res 34(3):955-67
Gaba A, et al.  (2005) Ribosome occupancy of the yeast CPA1 upstream open reading frame termination codon modulates nonsense-mediated mRNA decay. Mol Cell 20(3):449-60
Taylor R, et al.  (2005) Gene set coregulated by the Saccharomyces cerevisiae nonsense-mediated mRNA decay pathway. Eukaryot Cell 4(12):2066-77
Amrani N, et al.  (2004) A faux 3'-UTR promotes aberrant termination and triggers nonsense-mediated mRNA decay. Nature 432(7013):112-8
Enomoto S, et al.  (2004) Telomere cap components influence the rate of senescence in telomerase-deficient yeast cells. Mol Cell Biol 24(2):837-45
Harger JW and Dinman JD  (2004) Evidence against a direct role for the Upf proteins in frameshifting or nonsense codon readthrough. RNA 10(11):1721-9
Keeling KM, et al.  (2004) Leaky termination at premature stop codons antagonizes nonsense-mediated mRNA decay in S. cerevisiae. RNA 10(4):691-703
Kobayashi T, et al.  (2004) The GTP-binding release factor eRF3 as a key mediator coupling translation termination to mRNA decay. J Biol Chem 279(44):45693-700
Ross PL, et al.  (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 3(12):1154-69
de Pinto B, et al.  (2004) Overexpression of Upf1p compensates for mitochondrial splicing deficiency independently of its role in mRNA surveillance. Mol Microbiol 51(4):1129-42
Cao D and Parker R  (2003) Computational modeling and experimental analysis of nonsense-mediated decay in yeast. Cell 113(4):533-45
Dahlseid JN, et al.  (2003) mRNAs encoding telomerase components and regulators are controlled by UPF genes in Saccharomyces cerevisiae. Eukaryot Cell 2(1):134-42
Das B, et al.  (2003) Degradation of normal mRNA in the nucleus of Saccharomyces cerevisiae. Mol Cell Biol 23(16):5502-15
He F, et al.  (2003) Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast. Mol Cell 12(6):1439-52
Heikkinen HL, et al.  (2003) Initiation-mediated mRNA decay in yeast affects heat-shock mRNAs, and works through decapping and 5'-to-3' hydrolysis. Nucleic Acids Res 31(14):4006-16
Kebaara B, et al.  (2003) Genetic background affects relative nonsense mRNA accumulation in wild-type and upf mutant yeast strains. Curr Genet 43(3):171-7
Kebaara B, et al.  (2003) The Upf-dependent decay of wild-type PPR1 mRNA depends on its 5'-UTR and first 92 ORF nucleotides. Nucleic Acids Res 31(12):3157-65
Maderazo AB, et al.  (2003) Nonsense-containing mRNAs that accumulate in the absence of a functional nonsense-mediated mRNA decay pathway are destabilized rapidly upon its restitution. Mol Cell Biol 23(3):842-51
Mitchell P and Tollervey D  (2003) An NMD pathway in yeast involving accelerated deadenylation and exosome-mediated 3'-->5' degradation. Mol Cell 11(5):1405-13