XRN1/YGL173C Literature Guide Help

Other names published for XRN1: DST2, RAR5, SEP1, SKI1, KEM1, YGL173C

XRN1 - Function/Process (100)

ReferenceOther Genes Addressed
Egecioglu DE, et al.  (2012) Quality control of MATa1 splicing and exon skipping by nuclear RNA degradation. Nucleic Acids Res 40(4):1787-96
Geisler S, et al.  (2012) Decapping of long noncoding RNAs regulates inducible genes. Mol Cell 45(3):279-91
Harigaya Y and Parker R  (2012) Global analysis of mRNA decay intermediates in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 109(29):11764-9
Wilusz JE, et al.  (2011) tRNAs marked with CCACCA are targeted for degradation. Science 334(6057):817-21
Checkley MA, et al.  (2010) P-body components are required for Ty1 retrotransposition during assembly of retrotransposition-competent virus-like particles. Mol Cell Biol 30(2):382-98
Dutko JA, et al.  (2010) 5' to 3' mRNA decay factors colocalize with Ty1 gag and human APOBEC3G and promote Ty1 retrotransposition. J Virol 84(10):5052-66
Fujimura T and Esteban R  (2010) Yeast double-stranded RNA virus L-A deliberately synthesizes RNA transcripts with 5'-diphosphate. J Biol Chem 285(30):22911-8
Cole SE, et al.  (2009) A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay. Mol Cell 34(4):440-50
Jaag HM and Nagy PD  (2009) Silencing of Nicotiana benthamiana Xrn4p exoribonuclease promotes tombusvirus RNA accumulation and recombination. Virology 386(2):344-52
Warkocki Z, et al.  (2009) Reconstitution of both steps of Saccharomyces cerevisiae splicing with purified spliceosomal components. Nat Struct Mol Biol 16(12):1237-43
Esteban R, et al.  (2008) 20S RNA Narnavirus Defies the Antiviral Activity of SKI1/XRN1 in Saccharomyces cerevisiae. J Biol Chem 283(38):25812-20
Raisner RM and Madhani HD  (2008) Genomewide Screen for Negative Regulators of Sirtuin Activity in Saccharomyces cerevisiae Reveals 40 Loci and Links to Metabolism. Genetics 179(4):1933-44
Sayani S, et al.  (2008) Widespread impact of nonsense-mediated mRNA decay on the yeast intronome. Mol Cell 31(3):360-70
Teixeira D and Parker R  (2007) Analysis of P-body assembly in Saccharomyces cerevisiae. Mol Biol Cell 18(6):2274-87
Cheng CP, et al.  (2006) Suppression of viral RNA recombination by a host exoribonuclease. J Virol 80(6):2631-40
Gatbonton T, et al.  (2006) Telomere length as a quantitative trait: genome-wide survey and genetic mapping of telomere length-control genes in yeast. PLoS Genet 2(3):e35
Luo W, et al.  (2006) The role of Rat1 in coupling mRNA 3'-end processing to transcription termination: implications for a unified allosteric-torpedo model. Genes Dev 20(8):954-65
Lee A, et al.  (2005) Multiple RNA surveillance pathways limit aberrant expression of iron uptake mRNAs and prevent iron toxicity in S. cerevisiae. Mol Cell 19(1):39-51
Pathak R, et al.  (2005) A role for KEM1 at the START of the cell cycle in Saccharomyces cerevisiae. Curr Genet 48(5):300-9
Serviene E, et al.  (2005) Genome-wide screen identifies host genes affecting viral RNA recombination. Proc Natl Acad Sci U S A 102(30):10545-50
Taylor R, et al.  (2005) Gene set coregulated by the Saccharomyces cerevisiae nonsense-mediated mRNA decay pathway. Eukaryot Cell 4(12):2066-77
Zer C and Chanfreau G  (2005) Regulation and surveillance of normal and 3'-extended forms of the yeast aci-reductone dioxygenase mRNA by RNase III cleavage and exonucleolytic degradation. J Biol Chem 280(32):28997-9003
Gill T, et al.  (2004) RNase MRP cleaves the CLB2 mRNA to promote cell cycle progression: novel method of mRNA degradation. Mol Cell Biol 24(3):945-53
Kshirsagar M and Parker R  (2004) Identification of Edc3p as an enhancer of mRNA decapping in Saccharomyces cerevisiae. Genetics 166(2):729-39
Ross PL, et al.  (2004) Multiplexed protein quantitation in Saccharomyces cerevisiae using amine-reactive isobaric tagging reagents. Mol Cell Proteomics 3(12):1154-69
Yano T, et al.  (2004) Deletion of OSH3 gene confers resistance against ISP-1 in Saccharomyces cerevisiae. Biochem Biophys Res Commun 315(1):228-34
Danin-Kreiselman M, et al.  (2003) RNAse III-mediated degradation of unspliced pre-mRNAs and lariat introns. Mol Cell 11(5):1279-89
He F, et al.  (2003) Genome-wide analysis of mRNAs regulated by the nonsense-mediated and 5' to 3' mRNA decay pathways in yeast. Mol Cell 12(6):1439-52
Heikkinen HL, et al.  (2003) Initiation-mediated mRNA decay in yeast affects heat-shock mRNAs, and works through decapping and 5'-to-3' hydrolysis. Nucleic Acids Res 31(14):4006-16
Kebaara B, et al.  (2003) The Upf-dependent decay of wild-type PPR1 mRNA depends on its 5'-UTR and first 92 ORF nucleotides. Nucleic Acids Res 31(12):3157-65