RDN1 Literature Guide Help

RDN1 - DNA/RNA Sequence Features (27)

ReferenceOther Genes Addressed
Ganley AR and Kobayashi T  (2011) Monitoring the rate and dynamics of concerted evolution in the ribosomal DNA repeats of Saccharomyces cerevisiae using experimental evolution. Mol Biol Evol 28(10):2883-91
Miyazaki T and Kobayashi T  (2011) Visualization of the dynamic behavior of ribosomal RNA gene repeats in living yeast cells. Genes Cells 16(5):491-502
Vader G, et al.  (2011) Protection of repetitive DNA borders from self-induced meiotic instability.LID - 10.1038/nature10331 [doi] Nature ()
Davey RP, et al.  (2010) TURNIP: tracking unresolved nucleotide polymorphisms in large hard-to-assemble regions of repetitive DNA sequence. Bioinformatics 26(22):2908-9
Fritsch O, et al.  (2010) DNA ligase 4 stabilizes the ribosomal DNA array upon fork collapse at the replication fork barrier. DNA Repair (Amst) 9(8):879-888
Heidinger-Pauli JM, et al.  (2010) Systematic reduction of cohesin differentially affects chromosome segregation, condensation, and DNA repair. Curr Biol 20(10):957-63
Torres-Machorro AL, et al.  (2010) Ribosomal RNA genes in eukaryotic microorganisms: witnesses of phylogeny? FEMS Microbiol Rev 34(1):59-86
Biswas M, et al.  (2009) Limiting the extent of the RDN1 heterochromatin domain by a silencing barrier and Sir2 protein levels in Saccharomyces cerevisiae. Mol Cell Biol 29(10):2889-98
Dulev S, et al.  (2009) Essential global role of CDC14 in DNA synthesis revealed by chromosome underreplication unrecognized by checkpoints in cdc14 mutants. Proc Natl Acad Sci U S A 106(34):14466-71
James SA, et al.  (2009) Repetitive sequence variation and dynamics in the ribosomal DNA array of Saccharomyces cerevisiae as revealed by whole-genome resequencing. Genome Res 19(4):626-35
Tsang CK and Zheng XF  (2009) Opposing role of condensin and radiation-sensitive gene RAD52 in ribosomal DNA stability regulation. J Biol Chem 284(33):21908-19
Tremblay M, et al.  (2008) Complementary Roles of Yeast Rad4p and Rad34p in Nucleotide Excision Repair of Active and Inactive rRNA Gene Chromatin. Mol Cell Biol 28(24):7504-13
Divol B, et al.  (2006) Genetic characterization of strains of Saccharomycescerevisiae responsible for 'refermentation' in Botrytis-affected wines. J Appl Microbiol 100(3):516-26
Kim YH, et al.  (2006) Chromosome XII context is important for rDNA function in yeast. Nucleic Acids Res 34(10):2914-24
Fahy D, et al.  (2005) Rapid changes in transcription and chromatin structure of ribosomal genes in yeast during growth phase transitions. Exp Cell Res 305(2):365-73
Ganley AR, et al.  (2005) Identifying gene-independent noncoding functional elements in the yeast ribosomal DNA by phylogenetic footprinting. Proc Natl Acad Sci U S A 102(33):11787-92
Motovali-Bashi M, et al.  (2004) Unequal sister chromatid exchange in the rDNA array of Saccharomyces cerevisiae. Mutat Res 564(2):129-37
Wai HH, et al.  (2000) Complete deletion of yeast chromosomal rDNA repeats and integration of a new rDNA repeat: use of rDNA deletion strains for functional analysis of rDNA promoter elements in vivo. Nucleic Acids Res 28(18):3524-34
Reeder RH, et al.  (1999) Saccharomyces cerevisiae RNA polymerase I terminates transcription at the Reb1 terminator in vivo. Mol Cell Biol 19(11):7369-76
Valente P, et al.  (1999) Sequencing as a tool in yeast molecular taxonomy. Can J Microbiol 45(11):949-58
Bryk M, et al.  (1997) Transcriptional silencing of Ty1 elements in the RDN1 locus of yeast. Genes Dev 11(2):255-69
Johnston M, et al.  (1997) The nucleotide sequence of Saccharomyces cerevisiae chromosome XII. Nature 387(6632 Suppl):87-90
Dammann R, et al.  (1995) Transcription in the yeast rRNA gene locus: distribution of the active gene copies and chromatin structure of their flanking regulatory sequences. Mol Cell Biol 15(10):5294-303
Swanson ME, et al.  (1985) Characterization of an RNA polymerase I-dependent promoter within the spacer region of yeast ribosomal cistrons. J Biol Chem 260(17):9905-15
Zamb TJ and Petes TD  (1982) Analysis of the junction between ribosomal RNA genes and single-copy chromosomal sequences in the yeast Saccharomyces cerevisiae. Cell 28(2):355-64
Kaback DB and Halvorson HO  (1978) Ribosomal DNA magnification in Saccharomyces cerevisiae. J Bacteriol 134(1):237-45
Nath K and Bollon AP  (1977) Organization of the yeast ribosomal RNA gene cluster via cloning and restriction analysis. J Biol Chem 252(18):6562-71