SNR6/snR6 Literature Guide Help

Other names published for SNR6: U6, U6 snRNA, snR6

SNR6 - DNA/RNA Sequence Features (45)

Results: 1 - 30 of 45 records
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ReferenceOther Genes Addressed
Gonzalez-Aguilera C, et al.  (2011) Nab2 functions in the metabolism of RNA driven by polymerases II and III. Mol Biol Cell 22(15):2729-40
Perriman R and Ares M Jr  (2010) Invariant U2 snRNA nucleotides form a stem loop to recognize the intron early in splicing. Mol Cell 38(3):416-27
Frazer LN, et al.  (2009) Analysis of synthetic lethality reveals genetic interactions between the GTPase Snu114p and snRNAs in the catalytic core of the Saccharomyces cerevisiae spliceosome. Genetics 183(2):497-515-1SI-4SI
Guo Z, et al.  (2009) Single-molecule analysis of protein-free U2-U6 snRNAs. Nat Struct Mol Biol 16(11):1154-9
Martin-Tumasz S and Butcher SE  (2009) (1)H, (13)C and (15)N resonance assignments of a ribonucleoprotein complex consisting of Prp24-RRM2 bound to a fragment of U6 RNA. Biomol NMR Assign 3(2):227-30
Mefford MA and Staley JP  (2009) Evidence that U2/U6 helix I promotes both catalytic steps of pre-mRNA splicing and rearranges in between these steps. RNA 15(7):1386-97
Venditti V, et al.  (2009) Minimum-energy path for a u6 RNA conformational change involving protonation, base-pair rearrangement and base flipping. J Mol Biol 391(5):894-905
van Werven FJ, et al.  (2009) Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome. Nat Struct Mol Biol 16(10):1043-8
Arimbasseri AG and Bhargava P  (2008) Chromatin structure and expression of a gene transcribed by RNA polymerase III are independent of H2A.Z deposition. Mol Cell Biol 28(8):2598-607
D'Ambrosio C, et al.  (2008) Identification of cis-acting sites for condensin loading onto budding yeast chromosomes. Genes Dev 22(16):2215-27
Soragni E and Kassavetis GA  (2008) Absolute Gene Occupancies by RNA Polymerase III, TFIIIB, and TFIIIC in Saccharomyces cerevisiae. J Biol Chem 283(39):26568-76
McManus CJ, et al.  (2007) A dynamic bulge in the U6 RNA internal stem loop functions in spliceosome assembly and activation. RNA 13(12):2252-2265
Mitrovich QM and Guthrie C  (2007) Evolution of small nuclear RNAs in S. cerevisiae, C. albicans, and other hemiascomycetous yeasts. RNA 13(12):2066-2080
Smith DJ, et al.  (2007) trans-splicing to spliceosomal U2 snRNA suggests disruption of branch site-U2 pairing during pre-mRNA splicing. Mol Cell 26(6):883-90
Marck C, et al.  (2006) The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications. Nucleic Acids Res 34(6):1816-35
Tsihlis ND and Grove A  (2006) The Saccharomyces cerevisiae RNA polymerase III recruitment factor subunits Brf1 and Bdp1 impose a strict sequence preference for the downstream half of the TATA box. Nucleic Acids Res 34(19):5585-93
Turner IA, et al.  (2006) Dissection of Prp8 protein defines multiple interactions with crucial RNA sequences in the catalytic core of the spliceosome. RNA 12(3):375-86
Hilliker AK and Staley JP  (2004) Multiple functions for the invariant AGC triad of U6 snRNA. RNA 10(6):921-8
Kaiser MW, et al.  (2004) Position-dependent function of a B block promoter element implies a specialized chromatin structure on the S.cerevisiae U6 RNA gene, SNR6. Nucleic Acids Res 32(14):4297-305
Reiter NJ, et al.  (2004) Dynamics in the U6 RNA intramolecular stem-loop: a base flipping conformational change. Biochemistry 43(43):13739-47
Ryan DE, et al.  (2004) New tertiary constraints between the RNA components of active yeast spliceosomes: a photo-crosslinking study. RNA 10(8):1251-65
Sashital DG, et al.  (2004) U2-U6 RNA folding reveals a group II intron-like domain and a four-helix junction. Nat Struct Mol Biol 11(12):1237-42
Reiter NJ, et al.  (2003) Structure of the U6 RNA intramolecular stem-loop harboring an S(P)-phosphorothioate modification. RNA 9(5):533-42
Sashital DG, et al.  (2003) Structural basis for a lethal mutation in U6 RNA. Biochemistry 42(6):1470-7
Schroder O, et al.  (2003) A single-stranded promoter for RNA polymerase III. Proc Natl Acad Sci U S A 100(3):934-9
Lopez S, et al.  (2001) High-mobility-group proteins NHP6A and NHP6B participate in activation of the RNA polymerase III SNR6 gene. Mol Cell Biol 21(9):3096-104
Martin MP, et al.  (2001) A novel upstream RNA polymerase III promoter element becomes essential when the chromatin structure of the yeast U6 RNA gene is altered. Mol Cell Biol 21(19):6429-39
Shukla GC and Padgett RA  (2001) The intramolecular stem-loop structure of U6 snRNA can functionally replace the U6atac snRNA stem-loop. RNA 7(1):94-105
Tuschl T, et al.  (2001) A ribozyme selected from variants of U6 snRNA promotes 2',5'-branch formation. RNA 7(1):29-43
Chang JS and McPheeters DS  (2000) Identification of a U2/U6 helix la mutant that influences 3' splice site selection during nuclear pre-mRNA splicing. RNA 6(8):1120-30
Results: 1 - 30 of 45 records
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