MIG1/YGL035C Literature Guide Help

Other names published for MIG1: CAT4, SSN1, TDS22, YGL035C

MIG1 - Computational analysis (28)

ReferenceOther Genes Addressed
Casamayor A, et al.  (2012) The role of the Snf1 kinase in the adaptive response of Saccharomyces cerevisiae to alkaline pH stress. Biochem J 444(1):39-49
Geijer C, et al.  (2012) Time course gene expression profiling of yeast spore germination reveals a network of transcription factors orchestrating the global response. BMC Genomics 13(1):554
Aburatani S  (2011) Application of structure equation modeling for inferring a serial transcriptional regulation in yeast. Gene Regul Syst Bio 5():75-88
Contador CA, et al.  (2011) Identification of transcription factors perturbed by the synthesis of high levels of a foreign protein in yeast saccharomyces cerevisiae. Biotechnol Prog 27(4):925-36
Ding S and Wang W  (2011) Recipes and mechanisms of cellular reprogramming: a case study on budding yeast Saccharomyces cerevisiae. BMC Syst Biol 5(1):50
Frey S, et al.  (2011) A mathematical analysis of nuclear intensity dynamics for Mig1-GFP under consideration of bleaching effects and background noise in Saccharomyces cerevisiae. Mol Biosyst 7(1):215-23
Gordan R, et al.  (2011) Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol 12(12):R125
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Balazsi G  (2010) Network reconstruction reveals new links between aging and calorie restriction in yeast. HFSP J 4(3-4):94-9
Kuttykrishnan S, et al.  (2010) A quantitative model of glucose signaling in yeast reveals an incoherent feed forward loop leading to a specific, transient pulse of transcription. Proc Natl Acad Sci U S A 107(38):16743-8
Wuster A and Babu MM  (2010) Transcriptional control of the quorum sensing response in yeast. Mol Biosyst 6(1):124-31
Gertz J, et al.  (2009) Analysis of combinatorial cis-regulation in synthetic and genomic promoters. Nature 457(7226):215-8
Jothi R, et al.  (2009) Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture. Mol Syst Biol 5:294
Lorenz DR, et al.  (2009) A network biology approach to aging in yeast. Proc Natl Acad Sci U S A 106(4):1145-50
Mak HC, et al.  (2009) Dynamic reprogramming of transcription factors to and from the subtelomere. Genome Res 19(6):1014-25
Prasad V and Venkatesh KV  (2008) Stochastic analysis of the GAL genetic switch in Saccharomyces cerevisiae: modeling and experiments reveal hierarchy in glucose repression. BMC Syst Biol 2:97
McCord RP, et al.  (2007) Inferring condition-specific transcription factor function from DNA binding and gene expression data. Mol Syst Biol 3():100
Roider HG, et al.  (2007) Predicting transcription factor affinities to DNA from a biophysical model. Bioinformatics 23(2):134-41
Buck MJ and Lieb JD  (2006) A chromatin-mediated mechanism for specification of conditional transcription factor targets. Nat Genet 38(12):1446-51
Chua G, et al.  (2006) Identifying transcription factor functions and targets by phenotypic activation. Proc Natl Acad Sci U S A 103(32):12045-50
Shida K  (2006) GibbsST: a Gibbs sampling method for motif discovery with enhanced resistance to local optima. BMC Bioinformatics 7:486
Yu H and Gerstein M  (2006) Genomic analysis of the hierarchical structure of regulatory networks. Proc Natl Acad Sci U S A 103(40):14724-31
Yu T and Li KC  (2005) Inference of transcriptional regulatory network by two-stage constrained space factor analysis. Bioinformatics 21(21):4033-8
Luscombe NM, et al.  (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431(7006):308-12
Middendorf M, et al.  (2004) Predicting genetic regulatory response using classification. Bioinformatics 20 Suppl 1():i232-40
Xue W, et al.  (2004) Enrichment of transcriptional regulatory sites in non-coding genomic region. Bioinformatics 20(4):569-75
Caselle M, et al.  (2002) Correlating overrepresented upstream motifs to gene expression: a computational approach to regulatory element discovery in eukaryotes. BMC Bioinformatics 3():7
Guelzim N, et al.  (2002) Topological and causal structure of the yeast transcriptional regulatory network. Nat Genet 31(1):60-3