HOG1/YLR113W Literature Guide Help

Other names published for HOG1: SSK3, YLR113W

HOG1 - Computational analysis (31)

Results: 1 - 30 of 31 records
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ReferenceOther Genes Addressed
Navlakha S, et al.  (2012) A Network-based Approach for Predicting Missing Pathway Interactions. PLoS Comput Biol 8(8):e1002640
Pelet S, et al.  (2012) An integrated image analysis platform to quantify signal transduction in single cells. Integr Biol (Camb) 4(10):1274-82
Schaber J, et al.  (2012) Modelling reveals novel roles of two parallel signalling pathways and homeostatic feedbacks in yeast. Mol Syst Biol 8():622
Sharifpoor S, et al.  (2012) Functional wiring of the yeast kinome revealed by global analysis of genetic network motifs. Genome Res 22(4):791-801
Tkach JM, et al.  (2012) Dissecting DNA damage response pathways by analysing protein localization and abundance changes during DNA replication stress. Nat Cell Biol 14(9):966-76
Wang L, et al.  (2012) Integrating phosphorylation network with transcriptional network reveals novel functional relationships. PLoS One 7(3):e33160
Zechner C, et al.  (2012) Moment-based inference predicts bimodality in transient gene expression. Proc Natl Acad Sci U S A 109(21):8340-5
Adrover MA, et al.  (2011) Time-Dependent Quantitative Multicomponent Control of the G1-S Network by the Stress-Activated Protein Kinase Hog1 upon Osmostress. Sci Signal 4(192):ra63
Klipp E  (2011) Computational Yeast Systems Biology: A Case Study for the MAP Kinase Cascade. Methods Mol Biol 759():323-43
Parmar JH, et al.  (2011) Characterization of the adaptive response and growth upon hyperosmotic shock in Saccharomyces cerevisiae. Mol Biosyst 7(4):1138-48
Pelet S, et al.  (2011) Transient activation of the HOG MAPK pathway regulates bimodal gene expression. Science 332(6030):732-5
Schaber J, et al.  (2011) Automated Ensemble Modeling with modelMaGe: Analyzing Feedback Mechanisms in the Sho1 Branch of the HOG Pathway. PLoS One 6(3):e14791
Thorne TW, et al.  (2011) Prediction of putative protein interactions through evolutionary analysis of osmotic stress response in the model yeast Saccharomyces cerevisae. Fungal Genet Biol 48(5):504-11
Kuhn C, et al.  (2010) Formal representation of the high osmolarity glycerol pathway in yeast. Genome Inform 22(1):69-83
Mok J, et al.  (2010) Deciphering protein kinase specificity through large-scale analysis of yeast phosphorylation site motifs. Sci Signal 3(109):ra12
Nandy SK, et al.  (2010) Reconstruction of the yeast protein-protein interaction network involved in nutrient sensing and global metabolic regulation. BMC Syst Biol 4():68
Waltermann C and Klipp E  (2010) Signal integration in budding yeast. Biochem Soc Trans 38(5):1257-64
Wang YC and Chen BS  (2010) Integrated cellular network of transcription regulations and protein-protein interactions. BMC Syst Biol 4():20
Zi Z, et al.  (2010) A Quantitative Study of the Hog1 MAPK Response to Fluctuating Osmotic Stress in Saccharomyces cerevisiae. PLoS One 5(3):e9522
Fiedler D, et al.  (2009) Functional organization of the S. cerevisiae phosphorylation network. Cell 136(5):952-63
Parmar JH, et al.  (2009) A model-based study delineating the roles of the two signaling branches of Saccharomyces cerevisiae, Sho1 and Sln1, during adaptation to osmotic stress. Phys Biol 6(3):36019
Rensing L and Ruoff P  (2009) How can yeast cells decide between three activated MAP kinase pathways? A model approach. J Theor Biol 257(4):578-87
Kuhn C, et al.  (2008) Exploring the impact of osmoadaptation on glycolysis using time-varying response-coefficients. Genome Inform 20:77-90
Nyswaner KM, et al.  (2008) Chromatin-associated genes protect the yeast genome from ty1 insertional mutagenesis. Genetics 178(1):197-214
Zhao XM, et al.  (2008) Uncovering signal transduction networks from high-throughput data by integer linear programming. Nucleic Acids Res 36(9):e48
Zou X, et al.  (2008) Modeling specificity in the yeast MAPK signaling networks. J Theor Biol 250(1):139-55
Gat-Viks I and Shamir R  (2007) Refinement and expansion of signaling pathways: The osmotic response network in yeast. Genome Res 17(3):358-67
Brinkworth RI, et al.  (2006) Protein kinases associated with the yeast phosphoproteome. BMC Bioinformatics 7():47
Mutalik VK and Venkatesh KV  (2006) Effect of the MAPK cascade structure, nuclear translocation and regulation of transcription factors on gene expression. Biosystems 85(2):144-57
Roberts GG and Hudson AP  (2006) Transcriptome profiling of Saccharomyces cerevisiae during a transition from fermentative to glycerol-based respiratory growth reveals extensive metabolic and structural remodeling. Mol Genet Genomics 276(2):170-86
Results: 1 - 30 of 31 records
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