CLB2/YPR119W Literature Guide Help

Other names published for CLB2: YPR119W

CLB2 - Computational analysis (46)

ReferenceOther Genes Addressed
Freire P, et al.  (2012) Interplay of transcriptional and proteolytic regulation in driving robust cell cycle progression. Mol Biosyst 8(3):863-70
Hancioglu B and Tyson JJ  (2012) A mathematical model of mitotic exit in budding yeast: the role of polo kinase. PLoS One 7(2):e30810
Thompson EG and Galitski T  (2012) Quantifying and analyzing the network basis of genetic complexity. PLoS Comput Biol 8(7):e1002583
Todd RG and Helikar T  (2012) Ergodic sets as cell phenotype of budding yeast cell cycle. PLoS One 7(10):e45780
Ball DA, et al.  (2011) Stochastic exit from mitosis in budding yeast: Model predictions and experimental observations. Cell Cycle 10(6):999-1009
Barberis M, et al.  (2011) Sic1 plays a role in timing and oscillatory behaviour of B-type cyclins. Biotechnol Adv 30(1):108-30
Ding S and Wang W  (2011) Recipes and mechanisms of cellular reprogramming: a case study on budding yeast Saccharomyces cerevisiae. BMC Syst Biol 5(1):50
Gallo CA, et al.  (2011) Discovering Time-Lagged Rules from Microarray Data using Gene Profile Classifiers. BMC Bioinformatics 12(1):123
Gormley M, et al.  (2011) An integrated framework to model cellular phenotype as a component of biochemical networks. Adv Bioinformatics 2011():608295
Verdicchio MP and Kim S  (2011) Identifying targets for intervention by analyzing basins of attraction. Pac Symp Biocomput ():350-61
Vinod PK, et al.  (2011) Computational modelling of mitotic exit in budding yeast: the role of separase and Cdc14 endocycles. J R Soc Interface 8(61):1128-41
Vohradska E and Vohradsky J  (2011) Virtual mutagenesis of the yeast cyclins genetic network reveals complex dynamics of transcriptional control networks. PLoS One 6(4):e18827
Zhang T, et al.  (2011) Cell cycle commitment in budding yeast emerges from the cooperation of multiple bistable switches. Open Biol 1(3):110009
Breitkreutz A, et al.  (2010) A global protein kinase and phosphatase interaction network in yeast. Science 328(5981):1043-6
Kaizu K, et al.  (2010) Fragilities caused by dosage imbalance in regulation of the budding yeast cell cycle. PLoS Genet 6(4):e1000919
Lionnet T, et al.  (2010) Nuclear physics: quantitative single-cell approaches to nuclear organization and gene expression. Cold Spring Harb Symp Quant Biol 75():113-26
Mangla K, et al.  (2010) Timing robustness in the budding and fission yeast cell cycles. PLoS One 5(2):e8906
Perkins TJ, et al.  (2010) Robust dynamics in minimal hybrid models of genetic networks. Philos Transact A Math Phys Eng Sci 368(1930):4961-75
To CC and Vohradsky J  (2010) Measurement variation determines the gene network topology reconstructed from experimental data: a case study of the yeast cyclin network. FASEB J 24(9):3468-78
Wang G, et al.  (2010) Process-based network decomposition reveals backbone motif structure. Proc Natl Acad Sci U S A 107(23):10478-83
Wang J, et al.  (2010) Potential and flux landscapes quantify the stability and robustness of budding yeast cell cycle network. Proc Natl Acad Sci U S A 107(18):8195-200
Alberghina L, et al.  (2009) Molecular networks and system-level properties. J Biotechnol 144(3):224-33
Ay F, et al.  (2009) Scalable steady state analysis of boolean biological regulatory networks. PLoS One 4(12):e7992
Faure A, et al.  (2009) Modular logical modelling of the budding yeast cell cycle. Mol Biosyst 5(12):1787-96
Fiedler D, et al.  (2009) Functional organization of the S. cerevisiae phosphorylation network. Cell 136(5):952-63
Lyu S  (2009) Combining boolean method with delay times for determining behaviors of biological networks. Conf Proc IEEE Eng Med Biol Soc 1():4884-7
Nguyen Ba AN, et al.  (2009) NLStradamus: a simple Hidden Markov Model for nuclear localization signal prediction. BMC Bioinformatics 10:202
Shmulevich I and Aitchison JD  (2009) Deterministic and stochastic models of genetic regulatory networks. Methods Enzymol 467():335-56
Tran N, et al.  (2009) In silico construction of a protein interaction landscape for nucleotide excision repair. Cell Biochem Biophys 53(2):101-14
Vu TT and Vohradsky J  (2009) Inference of active transcriptional networks by integration of gene expression kinetics modeling and multisource data. Genomics 93(5):426-33