CDC20/YGL116W Literature Guide Help

Other names published for CDC20: PAC5, YGL116W

CDC20 - Computational analysis (35)

ReferenceOther Genes Addressed
Fernandez MA, et al.  (2012) Identification of a core set of signature cell cycle genes whose relative order of time to peak expression is conserved across species. Nucleic Acids Res 40(7):2823-32
Freire P, et al.  (2012) Interplay of transcriptional and proteolytic regulation in driving robust cell cycle progression. Mol Biosyst 8(3):863-70
Hancioglu B and Tyson JJ  (2012) A mathematical model of mitotic exit in budding yeast: the role of polo kinase. PLoS One 7(2):e30810
Thompson EG and Galitski T  (2012) Quantifying and analyzing the network basis of genetic complexity. PLoS Comput Biol 8(7):e1002583
Todd RG and Helikar T  (2012) Ergodic sets as cell phenotype of budding yeast cell cycle. PLoS One 7(10):e45780
Gallo CA, et al.  (2011) Discovering Time-Lagged Rules from Microarray Data using Gene Profile Classifiers. BMC Bioinformatics 12(1):123
Gormley M, et al.  (2011) An integrated framework to model cellular phenotype as a component of biochemical networks. Adv Bioinformatics 2011():608295
Higa CH, et al.  (2011) Constraint-based analysis of gene interactions using restricted boolean networks and time-series data. BMC Proc 5 Suppl 2():S5
Verdicchio MP and Kim S  (2011) Identifying targets for intervention by analyzing basins of attraction. Pac Symp Biocomput ():350-61
Vinod PK, et al.  (2011) Computational modelling of mitotic exit in budding yeast: the role of separase and Cdc14 endocycles. J R Soc Interface 8(61):1128-41
Mangla K, et al.  (2010) Timing robustness in the budding and fission yeast cell cycles. PLoS One 5(2):e8906
Perkins TJ, et al.  (2010) Robust dynamics in minimal hybrid models of genetic networks. Philos Transact A Math Phys Eng Sci 368(1930):4961-75
Wang G, et al.  (2010) Process-based network decomposition reveals backbone motif structure. Proc Natl Acad Sci U S A 107(23):10478-83
Wang J, et al.  (2010) Potential and flux landscapes quantify the stability and robustness of budding yeast cell cycle network. Proc Natl Acad Sci U S A 107(18):8195-200
Ay F, et al.  (2009) Scalable steady state analysis of boolean biological regulatory networks. PLoS One 4(12):e7992
Doncic A, et al.  (2009) Reverse engineering of the spindle assembly checkpoint. PLoS One 4(8):e6495
Faure A, et al.  (2009) Modular logical modelling of the budding yeast cell cycle. Mol Biosyst 5(12):1787-96
Kar S, et al.  (2009) Exploring the roles of noise in the eukaryotic cell cycle. Proc Natl Acad Sci U S A 106(16):6471-6
Lyu S  (2009) Combining boolean method with delay times for determining behaviors of biological networks. Conf Proc IEEE Eng Med Biol Soc 1():4884-7
Shmulevich I and Aitchison JD  (2009) Deterministic and stochastic models of genetic regulatory networks. Methods Enzymol 467():335-56
Qi Y, et al.  (2008) Finding friends and enemies in an enemies-only network: A graph diffusion kernel for predicting novel genetic interactions and co-complex membership from yeast genetic interactions. Genome Res 18(12):1991-2004
Braunewell S and Bornholdt S  (2007) Superstability of the yeast cell-cycle dynamics: Ensuring causality in the presence of biochemical stochasticity. J Theor Biol 245(4):638-43
Lau KY, et al.  (2007) Function constrains network architecture and dynamics: a case study on the yeast cell cycle Boolean network. Phys Rev E Stat Nonlin Soft Matter Phys 75(5 Pt 1):051907
Moses AM, et al.  (2007) Clustering of phosphorylation site recognition motifs can be exploited to predict the targets of cyclin-dependent kinase. Genome Biol 8(2):R23
Okabe Y and Sasai M  (2007) Stable stochastic dynamics in yeast cell cycle. Biophys J 93(10):3451-9
Toth A, et al.  (2007) Mitotic exit in two dimensions. J Theor Biol 248(3):560-73
Wang RS, et al.  (2007) Inferring transcriptional regulatory networks from high-throughput data. Bioinformatics 23(22):3056-3064
Battogtokh D, et al.  (2006) Synchronization of eukaryotic cells by periodic forcing. Phys Rev Lett 96(14):148102
Clote P and Straubhaar J  (2006) Symmetric time warping, Boltzmann pair probabilities and functional genomics. J Math Biol 53(1):135-61
Wu WS, et al.  (2006) Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle. BMC Bioinformatics 7(1):421