STE12/YHR084W Literature Guide Help

Other names published for STE12: YHR084W

STE12 - Computational analysis (50)

Results: 31 - 50 of 50 records
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ReferenceOther Genes Addressed
Sengupta N, et al.  (2007) Crosstalk between cAMP-PKA and MAP kinase pathways is a key regulatory design necessary to regulate FLO11 expression. Biophys Chem 125(1):59-71
Sun W, et al.  (2007) Detection of eQTL modules mediated by activity levels of transcription factors. Bioinformatics 23(17):2290-7
Vinod PK and Venkatesh KV  (2007) Specificity of MAPK signaling towards FLO11 expression is established by crosstalk from cAMP pathway. Syst Synth Biol 1(2):99-108
Chua G, et al.  (2006) Identifying transcription factor functions and targets by phenotypic activation. Proc Natl Acad Sci U S A 103(32):12045-50
Galbraith SJ, et al.  (2006) Transcriptome network component analysis with limited microarray data. Bioinformatics 22(15):1886-94
Hart CE, et al.  (2006) Connectivity in the yeast cell cycle transcription network: inferences from neural networks. PLoS Comput Biol 2(12):e169
Kundaje A, et al.  (2006) A classification-based framework for predicting and analyzing gene regulatory response. BMC Bioinformatics 7 Suppl 1():S5
Shao D, et al.  (2006) Dynamic studies of scaffold-dependent mating pathway in yeast. Biophys J 91(11):3986-4001
Wu WS, et al.  (2006) Computational reconstruction of transcriptional regulatory modules of the yeast cell cycle. BMC Bioinformatics 7(1):421
Yu H and Gerstein M  (2006) Genomic analysis of the hierarchical structure of regulatory networks. Proc Natl Acad Sci U S A 103(40):14724-31
Yu X, et al.  (2006) Genome-wide prediction and characterization of interactions between transcription factors in Saccharomyces cerevisiae. Nucleic Acids Res 34(3):917-27
Yu T and Li KC  (2005) Inference of transcriptional regulatory network by two-stage constrained space factor analysis. Bioinformatics 21(21):4033-8
Kato M, et al.  (2004) Identifying combinatorial regulation of transcription factors and binding motifs. Genome Biol 5(8):R56
Kyoda K, et al.  (2004) DBRF-MEGN method: an algorithm for deducing minimum equivalent gene networks from large-scale gene expression profiles of gene deletion mutants. Bioinformatics 20(16):2662-75
Luscombe NM, et al.  (2004) Genomic analysis of regulatory network dynamics reveals large topological changes. Nature 431(7006):308-12
Imoto S, et al.  (2003) Combining microarrays and biological knowledge for estimating gene networks via Bayesian networks. Proc IEEE Comput Soc Bioinform Conf 2():104-13
Harrison R and DeLisi C  (2002) Condition specific transcription factor binding site characterization in Saccharomyces cerevisiae. Bioinformatics 18(10):1289-96
Liu XS, et al.  (2002) An algorithm for finding protein-DNA binding sites with applications to chromatin-immunoprecipitation microarray experiments. Nat Biotechnol 20(8):835-9
Birnbaum K, et al.  (2001) cis element/transcription factor analysis (cis/TF): a method for discovering transcription factor/cis element relationships. Genome Res 11(9):1567-73
Hughes JD, et al.  (2000) Computational identification of cis-regulatory elements associated with groups of functionally related genes in Saccharomyces cerevisiae. J Mol Biol 296(5):1205-14
Results: 31 - 50 of 50 records
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