FUS3/YBL016W Literature Guide Help

Other names published for FUS3: DAC2, YBL016W

FUS3 - Computational analysis (23)

ReferenceOther Genes Addressed
Gitter A, et al.  (2013) Linking the signaling cascades and dynamic regulatory networks controlling stress responses. Genome Res 23(2):365-76
Angermann BR, et al.  (2012) Computational modeling of cellular signaling processes embedded into dynamic spatial contexts.LID - 10.1038/nmeth.1861 [doi] Nat Methods ()
Nakabayashi J  (2012) Optimal ratio of scaffold complex to free Fus3 to maximise the accumulation of phosphorylated Fus3 in yeast pheromone signalling pathway. IET Syst Biol 6(1):9-21
Pelet S, et al.  (2012) An integrated image analysis platform to quantify signal transduction in single cells. Integr Biol (Camb) 4(10):1274-82
Wang L, et al.  (2012) Integrating phosphorylation network with transcriptional network reveals novel functional relationships. PLoS One 7(3):e33160
Stoma S, et al.  (2011) STSE: Spatio-Temporal Simulation Environment Dedicated to Biology. BMC Bioinformatics 12(1):126
Breitkreutz A, et al.  (2010) A global protein kinase and phosphatase interaction network in yeast. Science 328(5981):1043-6
Kaake RM, et al.  (2010) Characterization of cell cycle specific protein interaction networks of the yeast 26S proteasome complex by the QTAX strategy. J Proteome Res 9(4):2016-29
Mok J, et al.  (2010) Deciphering protein kinase specificity through large-scale analysis of yeast phosphorylation site motifs. Sci Signal 3(109):ra12
Waltermann C and Klipp E  (2010) Signal integration in budding yeast. Biochem Soc Trans 38(5):1257-64
Fiedler D, et al.  (2009) Functional organization of the S. cerevisiae phosphorylation network. Cell 136(5):952-63
Hu B, et al.  (2009) Mechanisms and constraints on yeast MAPK signaling specificity. Biophys J 96(12):4755-63
Rensing L and Ruoff P  (2009) How can yeast cells decide between three activated MAP kinase pathways? A model approach. J Theor Biol 257(4):578-87
Tanaka H and Yi TM  (2009) Reverse engineering a signaling network using alternative inputs. PLoS One 4(10):e7622
Chou S, et al.  (2008) Fus3-triggered Tec1 degradation modulates mating transcriptional output during the pheromone response. Mol Syst Biol 4:212
Kundaje A, et al.  (2008) A predictive model of the oxygen and heme regulatory network in yeast. PLoS Comput Biol 4(11):e1000224
Zhao XM, et al.  (2008) Uncovering signal transduction networks from high-throughput data by integer linear programming. Nucleic Acids Res 36(9):e48
Pincet F  (2007) Membrane recruitment of scaffold proteins drives specific signaling. PLoS ONE 2(10):e977
Brinkworth RI, et al.  (2006) Protein kinases associated with the yeast phosphoproteome. BMC Bioinformatics 7():47
Schaber J, et al.  (2006) A modelling approach to quantify dynamic crosstalk between the pheromone and the starvation pathway in baker's yeast. FEBS J 273(15):3520-33
Shao D, et al.  (2006) Dynamic studies of scaffold-dependent mating pathway in yeast. Biophys J 91(11):3986-4001
Kyoda K, et al.  (2004) DBRF-MEGN method: an algorithm for deducing minimum equivalent gene networks from large-scale gene expression profiles of gene deletion mutants. Bioinformatics 20(16):2662-75
Brinkworth RI, et al.  (2003) Structural basis and prediction of substrate specificity in protein serine/threonine kinases. Proc Natl Acad Sci U S A 100(1):74-9