NAM7/YMR080C Literature Guide Help

Other names published for NAM7: IFS2, MOF4, UPF1, SUP113, ATP-dependent RNA helicase NAM7, YMR080C

NAM7 - Alias (78)

ReferenceOther Genes Addressed
Plass M, et al.  (2012) RNA secondary structure mediates alternative 3'ss selection in Saccharomyces cerevisiae. RNA 18(6):1103-15
Wang Q and Wang L  (2012) Genetic incorporation of unnatural amino acids into proteins in yeast. Methods Mol Biol 794():199-213
Addinall SG, et al.  (2011) Quantitative Fitness Analysis Shows That NMD Proteins and Many Other Protein Complexes Suppress or Enhance Distinct Telomere Cap Defects. PLoS Genet 7(4):e1001362
Durand S and Lykke-Andersen J  (2011) SnapShot: Nonsense-mediated mRNA decay. Cell 145(2):324-324.e2
Swisher KD and Parker R  (2011) Interactions between Upf1 and the decapping factors Edc3 and Pat1 in Saccharomyces cerevisiae. PLoS One 6(10):e26547
Feuerhahn S, et al.  (2010) TERRA biogenesis, turnover and implications for function. FEBS Lett 584(17):3812-8
Johansson MJ and Jacobson A  (2010) Nonsense-mediated mRNA decay maintains translational fidelity by limiting magnesium uptake. Genes Dev 24(14):1491-5
Shabel'skaia SV and Zhuravleva GA  (2010) [Mutations of Sup35 gene cause defects of NMD] Mol Biol (Mosk) 44(1):51-9
Cole SE, et al.  (2009) A convergence of rRNA and mRNA quality control pathways revealed by mechanistic analysis of nonfunctional rRNA decay. Mol Cell 34(4):440-50
Crotti LB and Horowitz DS  (2009) Exon sequences at the splice junctions affect splicing fidelity and alternative splicing. Proc Natl Acad Sci U S A 106(45):18954-9
Fujii K, et al.  (2009) A role for ubiquitin in the clearance of nonfunctional rRNAs. Genes Dev 23(8):963-74
Ghazal G, et al.  (2009) Yeast RNase III triggers polyadenylation-independent transcription termination. Mol Cell 36(1):99-109
Hu W, et al.  (2009) Co-translational mRNA decay in Saccharomyces cerevisiae. Nature 461(7261):225-9
Kebaara BW and Atkin AL  (2009) Long 3'-UTRs target wild-type mRNAs for nonsense-mediated mRNA decay in Saccharomyces cerevisiae. Nucleic Acids Res 37(9):2771-8
Kolitz SE, et al.  (2009) Kinetic and thermodynamic analysis of the role of start codon/anticodon base pairing during eukaryotic translation initiation. RNA 15(1):138-52
Stalder L and Muhlemann O  (2009) Processing bodies are not required for mammalian nonsense-mediated mRNA decay. RNA 15(7):1265-73
[No authors listed]  (2009) [Search of genes influencing propagation of the prion-like antisuppressor determinant [ISP+] in yeast using insertion library] Mol Biol (Mosk) 43(3):392-9
Berretta J, et al.  (2008) A cryptic unstable transcript mediates transcriptional trans-silencing of the Ty1 retrotransposon in S. cerevisiae. Genes Dev 22(5):615-26
Feldbrugge M, et al.  (2008) The posttranscriptional machinery of Ustilago maydis. Fungal Genet Biol 45 Suppl 1:S40-6
Hogan DJ, et al.  (2008) Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system. PLoS Biol 6(10):e255
Muhlemann O, et al.  (2008) Recognition and elimination of nonsense mRNA. Biochim Biophys Acta 1779(9):538-49
Sayani S, et al.  (2008) Widespread impact of nonsense-mediated mRNA decay on the yeast intronome. Mol Cell 31(3):360-70
Takahashi S, et al.  (2008) Upf1 potentially serves as a RING-related E3 ubiquitin ligase via its association with Upf3 in yeast. RNA 14(9):1950-8
Chabelskaya S, et al.  (2007) Inactivation of NMD increases viability of sup45 nonsense mutants in Saccharomyces cerevisiae. BMC Mol Biol 8:71
Johansson MJ, et al.  (2007) Association of yeast Upf1p with direct substrates of the NMD pathway. Proc Natl Acad Sci U S A 104(52):20872-7
Kodama H, et al.  (2007) The role of N-terminal domain of translational release factor eRF3 for the control of functionality and stability in S. cerevisiae. Genes Cells 12(5):639-50
Das B, et al.  (2006) Mutant LYS2 mRNAs retained and degraded in the nucleus of Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 103(29):10871-6
Ford AS, et al.  (2006) Ebs1p, a negative regulator of gene expression controlled by the Upf proteins in the yeast Saccharomyces cerevisiae. Eukaryot Cell 5(2):301-12
Culbertson MR and Neeno-Eckwall E  (2005) Transcript selection and the recruitment of mRNA decay factors for NMD in Saccharomyces cerevisiae. RNA 11(9):1333-9
Ono B, et al.  (2005) Suppression of termination mutations caused by defects of the NMD machinery in Saccharomyces cerevisiae. Genes Genet Syst 80(5):311-6