TRA1/YHR099W Literature Guide Help

Other names published for TRA1: YHR099W

TRA1 - Additional Literature (55)

ReferenceOther Genes Addressed
Lu JY, et al.  (2013) Using functional proteome microarrays to study protein lysine acetylation. Methods Mol Biol 981():151-65
Miller C, et al.  (2012) Mediator phosphorylation prevents stress response transcription during non-stress conditions. J Biol Chem 287(53):44017-26
Sikorski TW, et al.  (2012) Proteomic analysis demonstrates activator- and chromatin-specific recruitment to promoters. J Biol Chem 287(42):35397-408
Arroyo J, et al.  (2011) Functional and genomic analyses of blocked protein O-mannosylation in baker's yeast. Mol Microbiol 79(6):1529-46
Josse L, et al.  (2011) Transcriptomic and phenotypic analysis of the effects of T-2 toxin on Saccharomyces cerevisiae: evidence of mitochondrial involvement. FEMS Yeast Res 11(1):133-50
Lee KK, et al.  (2011) Combinatorial depletion analysis to assemble the network architecture of the SAGA and ADA chromatin remodeling complexes. Mol Syst Biol 7():503
Stirling PC, et al.  (2011) The Complete Spectrum of Yeast Chromosome Instability Genes Identifies Candidate CIN Cancer Genes and Functional Roles for ASTRA Complex Components. PLoS Genet 7(4):e1002057
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
Wilson MA, et al.  (2011) Ubp8 and SAGA regulate Snf1 AMP kinase activity. Mol Cell Biol 31(15):3126-35
Altaf M, et al.  (2010) NuA4-dependent acetylation of nucleosomal histones H4 and H2A directly stimulates incorporation of H2A.Z by the SWR1 complex. J Biol Chem 285(21):15966-77
Bonnet J, et al.  (2010) The structural plasticity of SCA7 domains defines their differential nucleosome-binding properties. EMBO Rep 11(8):612-8
Breitkreutz A, et al.  (2010) A global protein kinase and phosphatase interaction network in yeast. Science 328(5981):1043-6
Herbig E, et al.  (2010) Mechanism of Mediator recruitment by tandem Gcn4 activation domains and three Gal11 activator-binding domains. Mol Cell Biol 30(10):2376-90
Li M, et al.  (2010) Identifying the overlapping complexes in protein interaction networks. Int J Data Min Bioinform 4(1):91-108
On T, et al.  (2010) The evolutionary landscape of the chromatin modification machinery reveals lineage specific gains, expansions, and losses. Proteins 78(9):2075-89
Ratnakumar S and Young ET  (2010) Snf1 dependence of peroxisomal gene expression is mediated by Adr1. J Biol Chem 285(14):10703-14
Zhou BO, et al.  (2010) SWR1 complex poises heterochromatin boundaries for antisilencing activity propagation. Mol Cell Biol 30(10):2391-400
Friis RM, et al.  (2009) A glycolytic burst drives glucose induction of global histone acetylation by picNuA4 and SAGA. Nucleic Acids Res 37(12):3969-80
Ginsburg DS, et al.  (2009) NuA4 Lysine Acetyltransferase Esa1 Is Targeted to Coding Regions and Stimulates Transcription Elongation with Gcn5. Mol Cell Biol 29(24):6473-87
Klockner C, et al.  (2009) Mutational Uncoupling of the Role of Sus1 in Nuclear Pore Complex Targeting of an mRNA Export Complex and Histone H2B Deubiquitination. J Biol Chem 284(18):12049-56
Mischerikow N, et al.  (2009) In-depth profiling of post-translational modifications on the related transcription factor complexes TFIID and SAGA. J Proteome Res 8(11):5020-30
Nishida H  (2009) Evolutionary conservation levels of subunits of histone-modifying protein complexes in fungi. Comp Funct Genomics379317
Teytelman L, et al.  (2009) Impact of chromatin structures on DNA processing for genomic analyses. PLoS One 4(8):e6700
van Werven FJ, et al.  (2009) Distinct promoter dynamics of the basal transcription factor TBP across the yeast genome. Nat Struct Mol Biol 16(10):1043-8
Arnett DR, et al.  (2008) A proteomics analysis of yeast Mot1p protein-protein associations: insights into mechanism. Mol Cell Proteomics 7(11):2090-106
Auger A, et al.  (2008) Eaf1 is the platform for NuA4 molecular assembly that evolutionarily links chromatin acetylation to ATP-dependent exchange of histone H2A variants. Mol Cell Biol 28(7):2257-70
Li S and Shogren-Knaak MA  (2008) Cross-talk between histone H3 tails produces cooperative nucleosome acetylation. Proc Natl Acad Sci U S A 105(47):18243-8
Shevchenko A, et al.  (2008) Chromatin Central: towards the comparative proteome by accurate mapping of the yeast proteomic environment. Genome Biol 9(11):R167
Wang YL, et al.  (2008) Human ATAC Is a GCN5/PCAF-containing Acetylase Complex with a Novel NC2-like Histone Fold Module That Interacts with the TATA-binding Protein. J Biol Chem 283(49):33808-15
Chang EJ, et al.  (2007) Prediction of cyclin-dependent kinase phosphorylation substrates. PLoS One 2(7):e656