RPN4/YDL020C Literature Guide Help

Other names published for RPN4: SON1, UFD5, YDL020C

RPN4 - Additional Literature (97)

ReferenceOther Genes Addressed
Curwin AJ, et al.  (2013) Localization of lipid raft proteins to the plasma membrane is a major function of the phospholipid transfer protein sec14. PLoS One 8(1):e55388
Gonzalez-Ramos D, et al.  (2013) Genome-scale analyses of butanol tolerance in Saccharomyces cerevisiae reveal an essential role of protein degradation. Biotechnol Biofuels 6(1):48
Barrault MB, et al.  (2012) Dual functions of the Hsm3 protein in chaperoning and scaffolding regulatory particle subunits during the proteasome assembly. Proc Natl Acad Sci U S A 109(17):E1001-10
Cap M, et al.  (2012) Cell differentiation within a yeast colony: metabolic and regulatory parallels with a tumor-affected organism. Mol Cell 46(4):436-48
Chang DT, et al.  (2012) A study on promoter characteristics of head-to-head genes in Saccharomyces cerevisiae. BMC Genomics 13 Suppl 1():S11
Chin SL, et al.  (2012) Dynamics of oscillatory phenotypes in Saccharomyces cerevisiae reveal a network of genome-wide transcriptional oscillators. FEBS J 279(6):1119-30
Ha SW, et al.  (2012) The N-terminal domain of Rpn4 serves as a portable ubiquitin-independent degron and is recognized by specific 19S RP subunits. Biochem Biophys Res Commun 419(2):226-31
Huebert DJ, et al.  (2012) Dynamic changes in nucleosome occupancy are not predictive of gene expression dynamics but are linked to transcription and chromatin regulators. Mol Cell Biol 32(9):1645-53
Khmelinskii A, et al.  (2012) Tandem fluorescent protein timers for in vivo analysis of protein dynamics.LID - 10.1038/nbt.2281 [doi] Nat Biotechnol ()
Louie RJ, et al.  (2012) A yeast phenomic model for the gene interaction network modulating CFTR-?F508 protein biogenesis. Genome Med 4(12):103
Pick E, et al.  (2012) The Minimal Deneddylase Core of the COP9 Signalosome Excludes the Csn6 MPN(-) Domain. PLoS One 7(8):e43980
Bakhrat A, et al.  (2011) UV and arsenate toxicity: a specific and sensitive yeast bioluminescence assay. Cell Biol Toxicol 27(3):227-36
Brohee S, et al.  (2011) Unraveling networks of co-regulated genes on the sole basis of genome sequences. Nucleic Acids Res 39(15):6340-58
Calcada D, et al.  (2011) Quantitative modeling of the Saccharomyces cerevisiae flr1 regulatory network using an s-system formalism. J Bioinform Comput Biol 9(5):613-30
Chang HY, et al.  (2011) Genome-wide analysis to identify pathways affecting telomere-initiated senescence in budding yeast. G3 (Bethesda) 1(3):197-208
Dange T, et al.  (2011) Blm10 protein promotes proteasomal substrate turnover by an active gating mechanism. J Biol Chem 286(50):42830-9
Erb I and van Nimwegen E  (2011) Transcription factor binding site positioning in yeast: proximal promoter motifs characterize tata-less promoters. PLoS One 6(9):e24279
Gordan R, et al.  (2011) Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol 12(12):R125
Kusmierczyk AR, et al.  (2011) A conserved 20S proteasome assembly factor requires a C-terminal HbYX motif for proteasomal precursor binding. Nat Struct Mol Biol 18(5):622-9
Monteiro PT, et al.  (2011) Qualitative modelling and formal verification of the FLR1 gene mancozeb response in Saccharomyces cerevisiae. IET Syst Biol 5(5):308
North M, et al.  (2011) Genome-wide functional profiling reveals genes required for tolerance to benzene metabolites in yeast. PLoS One 6(8):e24205
Santisteban MS, et al.  (2011) Histone variant H2A.Z and RNA polymerase II transcription elongation. Mol Cell Biol 31(9):1848-60
Tomko RJ Jr and Hochstrasser M  (2011) Incorporation of the Rpn12 subunit couples completion of proteasome regulatory particle lid assembly to lid-base joining. Mol Cell 44(6):907-17
Tran JR, et al.  (2011) A Cdc48p-associated factor modulates endoplasmic reticulum-associated degradation, cell stress, and ubiquitinated protein homeostasis. J Biol Chem 286(7):5744-55
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Berthelet S, et al.  (2010) Functional Genomics Analysis of the Saccharomyces cerevisiae Iron Responsive Transcription Factor Aft1 Reveals Iron-Independent Functions. Genetics 185(3):1111-28
Bhattacharya A, et al.  (2010) Why Dom34 Stimulates Growth of Cells with Defects of 40S Ribosomal Subunit Biosynthesis. Mol Cell Biol 30(23):5562-71
Fendt SM, et al.  (2010) Unraveling condition-dependent networks of transcription factors that control metabolic pathway activity in yeast. Mol Syst Biol 6():432
Fordyce PM, et al.  (2010) De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis. Nat Biotechnol 28(9):970-5
Franken J and Bauer FF  (2010) Carnitine supplementation has protective and detrimental effects in Saccharomyces cerevisiae that are genetically mediated. FEMS Yeast Res 10(3):270-81