REB1/YBR049C Literature Guide Help

Other names published for REB1: GRF2, YBR049C

REB1 - Additional Literature (107)

ReferenceOther Genes Addressed
Mayan MD  (2013) RNAP-II transcribes two small RNAs at the promoter and terminator regions of the RNAP-I gene in Saccharomyces cerevisiae. Yeast 30(1):25-32
Gossett AJ and Lieb JD  (2012) In Vivo Effects of Histone H3 Depletion on Nucleosome Occupancy and Position in Saccharomyces cerevisiae. PLoS Genet 8(6):e1002771
Hornung G, et al.  (2012) Nucleosome organization affects the sensitivity of gene expression to promoter mutations. Mol Cell 46(3):362-8
Lin L, et al.  (2012) Analysis of Gal4-directed transcription activation using Tra1 mutants selectively defective for interaction with Gal4. Proc Natl Acad Sci U S A 109(6):1997-2002
Reiter A, et al.  (2012) The Reb1-homologue Ydr026c/Nsi1 is required for efficient RNA polymerase I termination in yeast. EMBO J 31(16):3480-93
Ribaud V, et al.  (2012) DNA-end capping by the budding yeast transcription factor and subtelomeric binding protein Tbf1. EMBO J 31(1):138-49
Sharon E, et al.  (2012) Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.LID - 10.1038/nbt.2205 [doi] Nat Biotechnol ()
Smith DJ and Whitehouse I  (2012) Intrinsic coupling of lagging-strand synthesis to chromatin assembly.LID - 10.1038/nature10895 [doi] Nature ()
Vohradsky J  (2012) Stochastic simulation for the inference of transcriptional control network of yeast cyclins genes. Nucleic Acids Res 40(15):7096-103
Braglia P, et al.  (2011) Co-transcriptional RNA cleavage provides a failsafe termination mechanism for yeast RNA polymerase I. Nucleic Acids Res 39(4):1439-48
Contador CA, et al.  (2011) Identification of transcription factors perturbed by the synthesis of high levels of a foreign protein in yeast saccharomyces cerevisiae. Biotechnol Prog 27(4):925-36
Gordan R, et al.  (2011) Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol 12(12):R125
Henikoff JG, et al.  (2011) Epigenome characterization at single base-pair resolution. Proc Natl Acad Sci U S A 108(45):18318-23
Konopka CA, et al.  (2011) A yeast model for polyalanine-expansion aggregation and toxicity. Mol Biol Cell 22(12):1971-84
Pan J, et al.  (2011) A Hierarchical Combination of Factors Shapes the Genome-wide Topography of Yeast Meiotic Recombination Initiation. Cell 144(5):719-31
Rhee HS and Pugh BF  (2011) Comprehensive Genome-wide Protein-DNA Interactions Detected at Single-Nucleotide Resolution. Cell 147(6):1408-19
Smith JJ, et al.  (2011) Environment-responsive transcription factors bind subtelomeric elements and regulate gene silencing. Mol Syst Biol 7():455
Tsankov A, et al.  (2011) Evolutionary divergence of intrinsic and trans-regulated nucleosome positioning sequences reveals plastic rules for chromatin organization. Genome Res 21(11):1851-62
Venters BJ, et al.  (2011) A comprehensive genomic binding map of gene and chromatin regulatory proteins in Saccharomyces. Mol Cell 41(4):480-92
Wang H, et al.  (2011) Yeast cell cycle transcription factors identification by variable selection criteria. Gene 485(2):172-6
Zhang Z, et al.  (2011) A packing mechanism for nucleosome organization reconstituted across a eukaryotic genome. Science 332(6032):977-80
Babbitt GA  (2010) Relaxed selection against accidental binding of transcription factors with conserved chromatin contexts. Gene 466(1-2):43-8
Fordyce PM, et al.  (2010) De novo identification and biophysical characterization of transcription-factor binding sites with microfluidic affinity analysis. Nat Biotechnol 28(9):970-5
Goetze H, et al.  (2010) Alternative Chromatin Structures of the 35S rRNA Genes in Saccharomyces cerevisiae Provide a Molecular Basis for the Selective Recruitment of RNA Polymerases I and II. Mol Cell Biol 30(8):2028-45
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
Hu J, et al.  (2010) Analysis of transcriptional synergy between upstream regions and introns in ribosomal protein genes of yeast. Comput Biol Chem 34(2):106-14
Mayan M and Aragon L  (2010) Cis-interactions between non-coding ribosomal spacers dependent on RNAP-II separate RNAP-I and RNAP-III transcription domains. Cell Cycle 9(21):4328-37
Mogno I, et al.  (2010) TATA is a modular component of synthetic promoters. Genome Res 20(10):1391-7
Tanaka Y, et al.  (2010) Positional variations among heterogeneous nucleosome maps give dynamical information on chromatin. Chromosoma 119(4):391-404
Tsankov AM, et al.  (2010) The role of nucleosome positioning in the evolution of gene regulation. PLoS Biol 8(7):e1000414