NDD1/YOR372C Literature Guide Help

Other names published for NDD1: YOR372C

NDD1 - Additional Literature (48)

Results: 1 - 30 of 48 records
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ReferenceOther Genes Addressed
Bastos de Oliveira FM, et al.  (2012) Linking DNA replication checkpoint to MBF cell-cycle transcription reveals a distinct class of G1/S genes. EMBO J 31(7):1798-810
Douglas AC, et al.  (2012) Functional analysis with a barcoder yeast gene overexpression system. G3 (Bethesda) 2(10):1279-89
Simmons Kovacs LA, et al.  (2012) Cyclin-dependent kinases are regulators and effectors of oscillations driven by a transcription factor network. Mol Cell 45(5):669-79
Vohradsky J  (2012) Stochastic simulation for the inference of transcriptional control network of yeast cyclins genes. Nucleic Acids Res 40(15):7096-103
Alabrudzinska M, et al.  (2011) Dipoid-Specific Genome Stability Genes of S. cerevisiae: Genomic Screen Reveals Haploidization as an Escape from Persisting DNA Rearrangement Stress. PLoS One 6(6):e21124
Ambroset C, et al.  (2011) Deciphering the molecular basis of wine yeast fermentation traits using a combined genetic and genomic approach. G3 (Bethesda) 1(4):263-81
Gandhi SJ, et al.  (2011) Transcription of functionally related constitutive genes is not coordinated. Nat Struct Mol Biol 18(1):27-34
Koivomagi M, et al.  (2011) Dynamics of Cdk1 Substrate Specificity during the Cell Cycle. Mol Cell 42(5):610-23
Miller C, et al.  (2011) Dynamic transcriptome analysis measures rates of mRNA synthesis and decay in yeast. Mol Syst Biol 7():458
Tuglus C and van der Laan MJ  (2011) Repeated measures semiparametric regression using targeted maximum likelihood methodology with application to transcription factor activity discovery. Stat Appl Genet Mol Biol 10(1):Article2
Vohradska E and Vohradsky J  (2011) Virtual mutagenesis of the yeast cyclins genetic network reveals complex dynamics of transcriptional control networks. PLoS One 6(4):e18827
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
To CC and Vohradsky J  (2010) Measurement variation determines the gene network topology reconstructed from experimental data: a case study of the yeast cyclin network. FASEB J 24(9):3468-78
Chen T and Li F  (2009) Identifying cell cycle regulators and combinatorial interactions among transcription factors with microarray data and ChIP-chip data. Int J Bioinform Res Appl 5(6):625-46
Li A and Tuck D  (2009) An effective tri-clustering algorithm combining expression data with gene regulation information. Gene Regul Syst Bio 3:49-64
Li L, et al.  (2009) Budding yeast SSD1-V regulates transcript levels of many longevity genes and extends chronological life span in purified quiescent cells. Mol Biol Cell 20(17):3851-64
Sekiya M, et al.  (2009) Transcription factors of M-phase cyclin CLB2 in the yeast cell wall integrity checkpoint. Genes Genet Syst 84(4):269-76
Xiao Y and Segal MR  (2009) Identification of yeast transcriptional regulation networks using multivariate random forests. PLoS Comput Biol 5(6):e1000414
Hogan DJ, et al.  (2008) Diverse RNA-binding proteins interact with functionally related sets of RNAs, suggesting an extensive regulatory system. PLoS Biol 6(10):e255
Szkotnicki L, et al.  (2008) The checkpoint kinase Hsl1p is activated by Elm1p-dependent phosphorylation. Mol Biol Cell 19(11):4675-86
Wu WS and Li WH  (2008) Systematic identification of yeast cell cycle transcription factors using multiple data sources. BMC Bioinformatics 9:522
Chang EJ, et al.  (2007) Prediction of cyclin-dependent kinase phosphorylation substrates. PLoS One 2(7):e656
Chen G, et al.  (2007) Clustering of genes into regulons using integrated modeling-COGRIM. Genome Biol 8(1):R4
Lu Y, et al.  (2007) Combined analysis reveals a core set of cycling genes. Genome Biol 8(7):R146
Moses AM, et al.  (2007) Clustering of phosphorylation site recognition motifs can be exploited to predict the targets of cyclin-dependent kinase. Genome Biol 8(2):R23
Sherriff JA, et al.  (2007) The Isw2 chromatin-remodeling ATPase cooperates with the Fkh2 transcription factor to repress transcription of the B-type cyclin gene CLB2. Mol Cell Biol 27(8):2848-60
Coic E, et al.  (2006) Cell cycle-dependent regulation of Saccharomyces cerevisiae donor preference during mating-type switching by SBF (Swi4/Swi6) and Fkh1. Mol Cell Biol 26(14):5470-80
Galbraith SJ, et al.  (2006) Transcriptome network component analysis with limited microarray data. Bioinformatics 22(15):1886-94
Hart CE, et al.  (2006) Connectivity in the yeast cell cycle transcription network: inferences from neural networks. PLoS Comput Biol 2(12):e169
Pramila T, et al.  (2006) The Forkhead transcription factor Hcm1 regulates chromosome segregation genes and fills the S-phase gap in the transcriptional circuitry of the cell cycle. Genes Dev 20(16):2266-78
Results: 1 - 30 of 48 records
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