FHL1/YPR104C Literature Guide Help

Other names published for FHL1: SPP42, YPR104C

FHL1 - Additional Literature (63)

ReferenceOther Genes Addressed
Mallick J and Whiteway M  (2013) The evolutionary rewiring of the ribosomal protein transcription pathway modifies the interaction of transcription factor heteromer Interacts with Fork-head 1-Fork-head Like 1 (Ifh1-Fhl1) with the DNA-binding specificity element. J Biol Chem ()
Shi L and Tu BP  (2013) Acetyl-CoA induces transcription of the key G1 cyclin CLN3 to promote entry into the cell division cycle in Saccharomyces cerevisiae. Proc Natl Acad Sci U S A 110(18):7318-23
Chang DT, et al.  (2012) A study on promoter characteristics of head-to-head genes in Saccharomyces cerevisiae. BMC Genomics 13 Suppl 1():S11
Chin SL, et al.  (2012) Dynamics of oscillatory phenotypes in Saccharomyces cerevisiae reveal a network of genome-wide transcriptional oscillators. FEBS J 279(6):1119-30
Geijer C, et al.  (2012) Time course gene expression profiling of yeast spore germination reveals a network of transcription factors orchestrating the global response. BMC Genomics 13(1):554
Miller C, et al.  (2012) Mediator phosphorylation prevents stress response transcription during non-stress conditions. J Biol Chem 287(53):44017-26
Sharon E, et al.  (2012) Inferring gene regulatory logic from high-throughput measurements of thousands of systematically designed promoters.LID - 10.1038/nbt.2205 [doi] Nat Biotechnol ()
Boender LG, et al.  (2011) Extreme calorie restriction and energy source starvation in Saccharomyces cerevisiae represent distinct physiological states. Biochim Biophys Acta 1813(12):2133-44
Contador CA, et al.  (2011) Identification of transcription factors perturbed by the synthesis of high levels of a foreign protein in yeast saccharomyces cerevisiae. Biotechnol Prog 27(4):925-36
Ganapathi M, et al.  (2011) Extensive role of the general regulatory factors, Abf1 and Rap1, in determining genome-wide chromatin structure in budding yeast. Nucleic Acids Res 39(6):2032-44
Gordan R, et al.  (2011) Curated collection of yeast transcription factor DNA binding specificity data reveals novel structural and gene regulatory insights. Genome Biol 12(12):R125
Joshi A, et al.  (2011) Structural and functional organization of RNA regulons in the post-transcriptional regulatory network of yeast. Nucleic Acids Res 39(21):9108-17
Ratnakumar S, et al.  (2011) Phenomic and transcriptomic analyses reveal that autophagy plays a major role in desiccation tolerance in Saccharomyces cerevisiae. Mol Biosyst 7(1):139-49
Shah AN, et al.  (2011) Deletion of a subgroup of ribosome-related genes minimizes hypoxia-induced changes and confers hypoxia tolerance. Physiol Genomics 43(14):855-72
Sun Z, et al.  (2011) Molecular Determinants and Genetic Modifiers of Aggregation and Toxicity for the ALS Disease Protein FUS/TLS. PLoS Biol 9(4):e1000614
Xiao L, et al.  (2011) Expression of yeast high mobility group protein HMO1 is regulated by TOR signaling. Gene 489(1):55-62
Chen X, et al.  (2010) A dynamic Bayesian network for identifying protein-binding footprints from single molecule-based sequencing data. Bioinformatics 26(12):i334-42
Goh WS, et al.  (2010) Blurring of high-resolution data shows that the effect of intrinsic nucleosome occupancy on transcription factor binding is mostly regional, not local. PLoS Comput Biol 6(1):e1000649
Lavoie H, et al.  (2010) Evolutionary tinkering with conserved components of a transcriptional regulatory network. PLoS Biol 8(3):e1000329
Rodriguez-Colman MJ, et al.  (2010) The forkhead transcription factor hcm1 promotes mitochondrial biogenesis and stress resistance in yeast. J Biol Chem 285(47):37092-101
Tsankov AM, et al.  (2010) The role of nucleosome positioning in the evolution of gene regulation. PLoS Biol 8(7):e1000414
Chen AK, et al.  (2009) Response of Saccharomyces cerevisiae to stress-free acidification. J Microbiol 47(1):1-8
Chen T and Li F  (2009) Identifying cell cycle regulators and combinatorial interactions among transcription factors with microarray data and ChIP-chip data. Int J Bioinform Res Appl 5(6):625-46
Gordan R, et al.  (2009) Distinguishing direct versus indirect transcription factor-DNA interactions. Genome Res 19(11):2090-100
Hesselberth JR, et al.  (2009) Global mapping of protein-DNA interactions in vivo by digital genomic footprinting. Nat Methods 6(4):283-9
Joo YJ, et al.  (2009) Determination of the core promoter regions of the Saccharomyces cerevisiae RPS3 gene. Biochim Biophys Acta 1789(11-12):741-50
Jothi R, et al.  (2009) Genomic analysis reveals a tight link between transcription factor dynamics and regulatory network architecture. Mol Syst Biol 5:294
Swamy KB, et al.  (2009) Impact of DNA-binding position variants on yeast gene expression. Nucleic Acids Res 37(21):6991-7001
Teixeira MC, et al.  (2009) Genome-wide identification of Saccharomyces cerevisiae genes required for maximal tolerance to ethanol. Appl Environ Microbiol 75(18):5761-72
Xiao Y and Segal MR  (2009) Identification of yeast transcriptional regulation networks using multivariate random forests. PLoS Comput Biol 5(6):e1000414